Pelagovum pacificum: I8N54_19560
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Entry
I8N54_19560 CDS
T06971
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00550
Peptidoglycan biosynthesis
ppaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I8N54_19560 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppaf01003
]
I8N54_19560 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
I8N54_19560 (pbpC)
Enzymes [BR:
ppaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
I8N54_19560 (pbpC)
Glycosyltransferases [BR:
ppaf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
I8N54_19560 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
I8N54_19560 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
QQA42939
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All DBs
Position
3981754..3983787
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AA seq
677 aa
AA seq
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MSRRWAWVLFVAAVAMGALAHGRDRFDDWVDATVLPPLTVETSVEVLDRNGELLRPFLVA
DGRWRLAVGFDGVDRDYIDMLIRYEDKRFWDHHGIDPVAMTRAVYQAVRYGRVISGGSTL
TMQVARIIEDGTTGQMSGKLRQMRVALALERRLSKEEILTIYLNRAPFGGNLEGVRAATF
AYFRKPPNRLTPAQAALLVALPQSPEARRPDRDPAAARASRDRVLARMARDGILDPAEAE
AAITEAAPRGRHDFPALAAHLAERMTETDPVAGIHQTTLNAGLQAELEDLAAGAVRDAGD
RMQVAILVADHTTGEVLASVGSAAYTADARQGFVDMTQALRSPGSTLKPLVYGLAFDRGL
VHPETLIADRPVGFDGYAPQNFDGMFRGELPVRRALQLSLNVPVVSLLDALGPQHLLTGL
RRAGAEPALPGGRPGLAVALGGIGVTLEDLTRLYAAFANDGVAVDLRTRPDPTEGFVPHH
LMNRAAAWELGDILRDTPRPAGVMGEGIAYKTGTSYGYRDAWAMGYDGRHVIGVWMGRAD
GTPVPGIFGAGLAAPVLFSAFDRLKPEADSLPPPPPETLLVSNASLPQALQRFRPRGELV
ADGPRIAFPPQGAVVEGDLLVVKVRDGAAPFTWLANGAPVGQGHRREIQIDGLGPGFSDL
TVIDAEGRAARVSVEMR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgctgggcatgggtgctgtttgtcgccgcagtggcgatgggcgcgctcgcc
cacgggcgggatcgcttcgatgactgggtcgacgcgacggtcctgccgccgctgacggtc
gagacctcggtcgaggttctggaccggaacggcgaactgctgcgtcccttcctcgtcgcg
gacgggcgctggcggctcgctgttgggttcgacggggtggaccgcgattacatcgacatg
ctgatccgctacgaggacaagcgcttctgggatcaccacggcatcgacccggtcgcgatg
acccgcgccgtctaccaggcggtgcgctacgggcgggtgatctccggcggctcgaccctg
acgatgcaggtcgcgcggatcatcgaggacgggaccaccggacagatgtccggaaagctg
cggcagatgcgcgtcgcgctcgcgctcgagcgccggctgtcgaaggaggagatcctgacg
atctacctcaaccgtgcgccgttcggggggaacctcgaaggcgtgcgggccgcgaccttc
gcctacttccgcaaaccgccgaaccggctaaccccggcgcaggccgcgctgctggtcgcc
ctgccgcaatcgcccgaggcccgcaggcccgaccgtgacccggcggcggcacgcgcgtcg
cgggaccgggtgctggcccgtatggcgcgggacggcatcctcgatccggcagaggcggag
gccgcgatcaccgaggccgcgccgcggggacgtcacgatttcccggcgctcgccgcgcac
cttgccgaacgaatgaccgaaaccgatccggtggccggtatccaccagacgacgctgaac
gccggccttcaggccgagctcgaggatctcgctgccggcgcagtgcgcgacgcgggggac
cggatgcaggtggcgatcctcgtcgccgaccacacgacgggagaggtgctcgcctccgtc
ggctccgccgcttacaccgccgacgcgcggcagggcttcgtcgacatgacgcaggcgctt
cggtctcccggatccacgctgaagccgctggtctacgggctcgccttcgaccgggggctg
gtccatcccgaaacgctgatcgccgaccggcccgtcggcttcgacggctatgccccgcag
aatttcgatggcatgttccggggggaactgcccgtccgccgcgcgctgcaactgtcgctg
aacgtgccggtggtgagcctgctcgacgcgctcggcccgcagcatttgctgaccggcctg
cgccgcgccggggcggagcccgcgttgcccggcggtcgtcctggccttgccgtcgcgctc
ggcgggatcggcgtgacgctcgaggacctgacacggctctatgccgccttcgccaacgat
ggtgtcgccgtcgacctgcgcacccgccccgacccgaccgagggcttcgtgccgcatcac
ctgatgaaccgcgccgccgcgtgggagcttggcgatatcctccgcgacacgccgcgcccc
gccggcgtgatgggcgaggggatcgcctacaagaccggcacgtcctacggataccgggat
gcctgggcgatgggctatgacgggcggcatgtgatcggcgtgtggatgggccgcgccgac
ggcacaccggtgccgggcatcttcggggcgggcctcgccgcgccggtgcttttctccgct
ttcgaccggctgaagccggaggcggactcgctgccgcccccgccacccgagacgctgctg
gtgagcaatgcctccctgccgcaggcgcttcagcggttccgcccgcgcggcgagctggtc
gcggacggcccgcgcatcgcgttcccgccacagggcgccgtggtcgaaggagacctgctg
gtggtgaaggtccgcgacggggccgcgcctttcacgtggctcgccaacggcgcgccggtg
gggcaggggcaccgccgcgaaatccagatcgacgggctcggacccggcttttccgatctt
accgtcatcgacgccgaggggcgggcggcgcgcgtgtcggtcgaaatgcgctga
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