Pelagovum pacificum: I8N54_19640
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Entry
I8N54_19640 CDS
T06971
Name
(GenBank) phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00260
Glycine, serine and threonine metabolism
ppaf00270
Cysteine and methionine metabolism
ppaf00680
Methane metabolism
ppaf01100
Metabolic pathways
ppaf01110
Biosynthesis of secondary metabolites
ppaf01120
Microbial metabolism in diverse environments
ppaf01200
Carbon metabolism
ppaf01230
Biosynthesis of amino acids
Module
ppaf_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
I8N54_19640
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I8N54_19640
00270 Cysteine and methionine metabolism
I8N54_19640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppaf04147
]
I8N54_19640
Enzymes [BR:
ppaf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
I8N54_19640
1.1.1.399 2-oxoglutarate reductase
I8N54_19640
Exosome [BR:
ppaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
I8N54_19640
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
ACT
KARI_N
F420_oxidored
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
QQA42953
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Position
complement(3999231..4000823)
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AA seq
530 aa
AA seq
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MAPRVLISDKLSDAAVQIFKDRGIDVDFQPDLGKDKDKLLEVIGQYDGLAIRSATKVTEK
IIAAADNLKVIGRAGIGVDNVDIPEASRKGIIVMNTPFGNMITTAEHAIAMMFAVARQIP
EASASTHAGKWEKSKFMGVELTGKTLGVIGAGNIGGIVCTRGVGLRMKVVAYDPFLSDDR
AAELGVEKVELEDLLKRADFITLHVPLTDQTKNILSKENIAKTKKGVRIINCARGGLVDE
AALAEALKDGHVAGAAFDVFAEEPAKENPLFNLPNVVCTPHLGAATSEAQENVALQVAEQ
MSDYLLTGAVQNALNMPSVTAEEAKVMGPWIKLAGHLGNFIGQMTDEPIKAINILFDGQA
SEMNLSALTSSVVSGIMKVTNPDVNMVSAPVIAKERGVRISTTKQDQSGAFEGYIKVTVV
TTQRERSIGGTVFSDGKPRFIQIKGINLDAEVGRHMIYTTNTDLPGIIGTLGTTLGSNGV
NIANFTLGRSAEKGEAIALLYVDDVVPAKAVEELKATGKFQQVRPLVFDV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggccccccgcgttctcatctccgacaaactctccgacgccgccgttcagatcttcaag
gatcggggcatcgacgtcgacttccagcccgacctcggcaaggacaaggacaagctcctc
gaggtgatcggccagtatgacggcctcgccatccgctccgcgaccaaggtcacggaaaag
atcatcgccgccgccgacaacctcaaggtcatcggccgcgccggcatcggcgtcgacaac
gtcgacatccccgaggcgtcccgcaagggcatcatcgtgatgaacacgcccttcgggaac
atgatcacgacggcggagcacgccatcgcgatgatgttcgccgtcgcccgccagatcccc
gaggcctccgcctccacccacgccggcaagtgggagaagtccaagttcatgggtgtcgag
ctgaccggcaagacgctcggcgtgatcggggccggcaacatcggcggcatcgtctgcacc
cgcggcgtcggcctgcggatgaaggtcgtcgcctacgacccgttcctgtcggacgatcgc
gccgccgaactcggcgtcgagaaggtcgagctcgaggacctgctcaagcgcgccgacttc
atcacgctgcacgtgccgctgaccgaccagaccaagaacatcctgagcaaggaaaacatc
gccaagaccaagaaaggcgtgcggatcatcaactgcgcacgcggcggcctggtggacgag
gcagcgcttgccgaggcgctcaaggacggccacgtcgccggcgcggccttcgacgtcttc
gccgaggaaccggcgaaggaaaacccgctcttcaacctgcccaacgtcgtctgcacgccg
cacctcggcgccgcgacgtccgaagcgcaggaaaacgtcgccctgcaggtcgccgaacag
atgtccgactacctgctcaccggcgcggtgcagaacgcgctcaacatgccctccgtcacc
gcggaagaggcgaaggtcatgggcccttggatcaagctcgccggccacctcggcaacttc
atcggccagatgacggacgagccgatcaaggcgatcaacatcctgttcgacggtcaggca
tccgagatgaacctctcggcgctgacgtcttccgtcgtgtccggcatcatgaaggtgact
aaccccgacgtgaacatggtctccgccccggtcatcgccaaagagcgcggcgtgcgcatc
tcgacgaccaagcaggaccagtccggcgcgttcgagggctacatcaaggtgacggtcgtc
acgacgcagcgcgaacgctccatcggcggcaccgtgttcagtgacggcaagccgcgcttt
atccagatcaagggcatcaacctcgacgcggaggtgggccgccacatgatctacaccacc
aacaccgaccttcccggcatcatcgggacgctcggcaccacgctcggcagcaacggcgtg
aacatcgccaacttcaccctcggccgctccgcggagaagggcgaggcgatcgcgcttctc
tatgtcgatgacgtcgtacccgcgaaagcggtcgaagagctcaaggccaccggcaagttc
cagcaggtgcgccccctcgtcttcgacgtctga
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