Pelagovum pacificum: I8N54_20100
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Entry
I8N54_20100 CDS
T06971
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I8N54_20100
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QQA45102
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All DBs
Position
p_SM1903_2:complement(8009..9397)
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AA seq
462 aa
AA seq
DB search
MTDANIAQLLPYEEGAILLGKHAGQLVGVTDDRHLLTVAGSRAGKSSTCLKPNLKRWPSS
VLCIDPKGELAMETADARAAMGQAVYILDPFEEVKGPAAQYRVGFNPLAEIREGDPRDIV
DNASIVADALILPSKGDNSDHWSLSAKNLLRGLILYMLAKNADAASLTLLRKLVNSPLRA
PDDADADAPMSLSERFTEMVEDYPDDFGGVVAGVGGTMDGKPPNELGSIVSTAVEQTAFL
DGDPMTEHLGSIGLPSMPSLRQLKRTPTTIYLVLPASRMATHFRWLRVVLTLALAALERE
PMALPAPRKDTAPSVLFVLEEFPQLGYMRQIEAAAGLMAGYGVKLWTVLQDLSQLRTLYR
DSWETFIGNAGVVQAFGNTDATTLEYISRTLGTRQITETQDNRPTPSAMTSGARVSSETR
NTVPLLAPFEIALYGGRDTGRQFVMMAGKPPAYIERLLHTEV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcaaatatcgcccagctcctaccctacgaggaaggcgctatcctccttgga
aaacacgcgggccagctcgtcggggtgacggatgacaggcacctgctgacggtcgccgga
tcccgcgcgggtaaatcctcgacttgtctcaagccgaacctgaaacgatggccgtcctcc
gtcctgtgcatcgaccccaaaggcgagctggcgatggaaaccgccgacgcccgcgccgcc
atgggacaggctgtctacatcctcgacccgttcgaggaggtgaaaggccccgcggcgcag
taccgcgtcggcttcaaccctctggccgaaatccgcgagggcgacccccgcgacatcgtg
gataatgccagcatcgtcgccgacgccctcatcctgccgtccaagggcgacaattccgac
cactggtcgctctcggccaagaacctgctgcgcggcctcatcctctacatgctggcaaaa
aacgccgatgccgcatcgctgacccttctccgcaaactggtcaattccccgctccgcgct
cccgacgacgcggacgccgatgcaccgatgtccctgtccgaacggttcacggaaatggtg
gaggactatcccgacgacttcgggggtgtagtggcaggtgtcggcggaacgatggacggt
aaacccccaaacgagctgggttccatcgtctccacggccgtcgaacaaacggcttttctt
gatggcgaccctatgaccgaacatttgggtagcatcggcttgccctcgatgccttcgcta
cgccagctcaagcgaacaccgacaacaatctaccttgtgctgccagcatcgcgcatggcg
acgcattttcgatggctacgggtggtcctgacactcgccctcgctgcactcgagcgcgag
ccgatggccttgcctgccccacgcaaggacacggccccctctgtcctgttcgtgctcgag
gagtttccccagctcggctatatgcgtcaaattgaggccgcagcgggcctcatggcaggc
tacggggtcaagctatggacggtgttgcaggacctgtcccaactgcgcaccctttatcgc
gattcatgggaaaccttcattggcaatgcaggcgtcgtgcaggcgttcgggaacacagac
gcaacgacgctggaatacatctcccgtacactcggcacgcgccaaatcaccgaaacgcaa
gacaaccgccctaccccgtccgccatgacaagcggcgcgcgggtgtcgtctgagacccgc
aacaccgtcccgttgctcgctccctttgaaatcgccctctatggcgggcgtgacactggt
cggcaattcgtcatgatggcgggcaagccacccgcctacatagagcgtcttttgcatact
gaggtgtaa
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