Parvimonas parva: GAI15033_02510
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Entry
GAI15033_02510 CDS
T10920
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ppag Parvimonas parva
Pathway
ppag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GAI15033_02510 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppag03021
]
GAI15033_02510 (rpoC)
03400 DNA repair and recombination proteins [BR:
ppag03400
]
GAI15033_02510 (rpoC)
Enzymes [BR:
ppag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GAI15033_02510 (rpoC)
Transcription machinery [BR:
ppag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GAI15033_02510 (rpoC)
DNA repair and recombination proteins [BR:
ppag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GAI15033_02510 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
NusG_add
Peptidase_M23
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
BFT65675
LinkDB
All DBs
Position
243831..247469
Genome browser
AA seq
1212 aa
AA seq
DB search
MLELNNFDAMKIGLASPDKIRSWSRGEVKKPETINYRTLKPERDGLFCEKIFGPVKDWEC
NCGKYKRIKYKGNVCEKCGVEITKSKVRRERMGHIELVAPVSHIWYFKGIPSRMGLILDM
SPRALEKILYFANYVVLDAKDTDLYVKQLLTEGEYGEACEKFGSENFRVGMGAEAVKELL
ENINLDELSEELKKGLVDATGQKKIRLSRRLEVCEAFRKSGNRPEWMIIDVVPVIPPDLR
PMVQLEGGRFATSDLNDLYRRVINRNNRLKKLIELHAPEIIMRNEKRMLQEAVDTLIDNG
RHGKAVTGAGNRELKSLSDMLKGKTGRFRQNLLGKRVDYSGRSVIVVGPDLKFHQCGLPK
KMALELFKPFIMKQLVEDGVVHNIKSAKKYVERLNSNVWDILDKVIKDHPVLLNRAPTLH
RLGIQAFEPVLVEGKAIKLHPLVCTAYNADFDGDQMAVHLPLSTEAQAEARLLMLSTNNI
LAPKDGKPITTPAQDIVLGSYYLTSGTVEEQAVRSFMDYDEMFKAYSTKNVKIHDTVNVL
YRDEETGESQIVKSTVGRFIFNEHIPQDLGFVDRSKDKFSLEVDKLVDKKMLGKIVDKCF
RKHGNIKTAEVLDYIKSTGYKYSTIGAISISMNDVIVPEEKWGILKEAEEKIATYEELFK
DGLVSEQERYEYVISVWTKATEDITKILVSRQDPTNSISIMADSGARGNINQIRQLAGMR
GLMSSATGRIVEIPIKANFREGLSVQEFFISTHGSRKGLSDTALRTADSGYLTRRLVDVS
QDVIVREDDCCTDEYVLAKDFKDGNAVVEKLADRIVGRYSFEDVLNPTTGEILIRKNEMI
TEVLAEKVEKLGITELKVRSVLGCKAKHGVCAKCYGRNLATGNPVDIGEAVGIIAAQSIG
EPGTQLTMRTFHSGGIAGVGITQGLPRVEELFEARKPKGLAYITEIDGTVKLVDNKKRYD
IVVTAEDGDERIYAIPYGARIKVKDGMEIKAGDMLTEGSINPHDILAIKGPTGVQEYITK
EVQKVYRSQGVDIDDRHIEIIIKQMLSKVRIDTSGDTNFLEGSLVPFREVEAVNKEMLNE
DKMGATFDNVLLGITKASLATESFLSAASFQETTRVLTDASIKGKADGLLGLKENVILGK
LIPAGTGMKVYKSIEIDYETMEEEDRLMEEALLEENKTEEVEDSNETEETVKETEETVKE
TEEVKEVETVEE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
ttgttggaattaaataattttgatgcaatgaagattggattggcttcacctgataagatt
agaagttggtcaagaggagaagttaaaaaacctgaaaccataaattatagaacattaaaa
ccggaaagagacggacttttctgcgaaaagatttttggaccggttaaagactgggaatgt
aattgtggtaaatacaagagaataaaatacaagggaaatgtatgtgaaaaatgtggagtt
gaaatcacaaaatctaaagttagacgtgaaagaatgggtcatatagaacttgttgctcca
gtttctcatatatggtatttcaaaggaataccttcaagaatgggacttatattagatatg
agtcctagagcacttgaaaaaatattatattttgcaaattatgttgtacttgatgcaaaa
gacactgacctttatgttaaacaattattaactgaaggtgaatatggtgaggcttgtgaa
aaattcggttctgaaaatttcagagttggaatgggtgctgaggctgttaaagaacttttg
gaaaatattaatttagatgagctttcagaagaacttaaaaaaggtcttgtagatgcaaca
ggtcaaaagaaaatcagactttcaagaagacttgaagtttgtgaggcatttagaaaatca
ggaaacagacctgaatggatgattattgatgttgttcctgtaattccaccggatttaaga
cctatggtgcaacttgaaggtggaagatttgcaacttcagacttaaatgatttatacaga
cgtgttataaatagaaataacagacttaaaaaacttatcgaacttcatgctccggaaatc
attatgagaaatgaaaagagaatgttacaagaggctgtggatacattaattgataatgga
agacatggaaaagctgtaacgggagcaggaaatagagaacttaaatctctatcagatatg
ttaaaaggtaaaacaggaagattcagacaaaacttacttggtaaacgtgttgactactca
ggacgttctgtaatcgtagtagggcctgatttgaaattccaccaatgtggacttccaaag
aaaatggcacttgaattattcaaacctttcattatgaaacaattagttgaagatggagtt
gttcataatattaagagtgcaaagaaatatgttgaaagattaaattcaaatgtttgggat
atcttagataaagttatcaaagaccaccctgtacttttaaacagagcaccgactcttcac
agacttggtattcaagcgtttgaacctgttttagttgaaggaaaagctataaaattgcat
ccattagtttgtactgcatataatgccgactttgatggcgaccaaatggctgtccattta
cctctatcaacagaggcacaagcagaggcaagacttttgatgctttcaacaaataatatt
ttggctccaaaagacggtaagccaattacaactcctgcccaagatatcgtacttggttca
tactatttaacaagtggaactgttgaagaacaagctgttcgttcatttatggattatgat
gaaatgtttaaggcttattctacaaagaatgttaaaattcacgatacagttaatgtttta
tatagagatgaagaaacaggagaaagtcaaattgtaaaatcaacagttggtagatttatc
ttcaacgaacatattccacaagacttaggttttgttgatagaagtaaagataaattctca
ctagaagttgataaacttgtcgataaaaaaatgcttggtaaaattgtagataaatgtttt
agaaaacatggaaatatcaagactgccgaagtattagactatataaaatcaactggatat
aaatactcaactattggggctatttcaatctcaatgaatgacgtaattgttccggaagaa
aaatggggaattcttaaagaggcagaagaaaaaattgcaacttatgaagaattatttaaa
gatggtttagtttctgaacaagaaagatatgaatatgtaatcagcgtttggacaaaagcg
actgaagatattacaaaaatacttgtttcaagacaagaccctacaaacagtatctcaatc
atggcggactccggagccagaggtaatattaaccaaattagacagttagccggtatgcgt
ggacttatgagttctgcaactggtagaatcgtagaaattcctatcaaggcaaactttaga
gaaggtctttctgttcaagagttctttatttcaactcacggttcaagaaaaggactttca
gatacagcgcttagaactgccgactccggttacttaacaagaagacttgtagatgtttca
caagatgtgattgttagagaagatgattgttgtactgatgaatatgtattagctaaagat
ttcaaagacggaaatgctgtcgttgaaaaacttgcagatagaattgtagggagatattca
ttcgaagatgtattaaatccaactactggagaaatattaattcgtaaaaatgaaatgatt
actgaagttcttgcagaaaaagttgaaaaacttggaattactgaattaaaagttcgttct
gttttaggttgtaaagcaaaacatggtgtttgtgcaaaatgttatggacgtaaccttgca
acaggaaatccggttgatattggggaggctgttggtattattgctgctcaatcaattggg
gaacctggtactcagcttacaatgagaacattccactctggtggtatcgctggcgttgga
atcactcaaggtcttcctcgtgtggaagagctttttgaggcaagaaagccaaaaggactt
gcatatataactgaaatagacggaactgtaaaattagttgacaataagaagagatatgat
atagttgtaacagctgaagatggtgatgaaagaatttacgctatcccttatggagctaga
attaaagttaaagatggaatggaaattaaagcaggtgatatgcttactgaaggttctata
aatccacatgatattttagctatcaaaggaccaactggcgttcaagaatatatcactaaa
gaagttcaaaaagtttaccgtagccaaggggtagatatcgatgatagacatattgaaatt
attattaaacaaatgctatcaaaggttagaattgatacttcaggagatactaacttctta
gaaggaagtttagttccatttagagaagttgaggctgtaaacaaagaaatgttaaatgaa
gacaagatgggtgctacatttgataatgtacttcttggtattacaaaagcatctcttgct
actgaaagtttcttatcagctgcatcattccaagaaacaactagagttttaactgatgcc
tctatcaaaggaaaagcagatggtttattaggattaaaagaaaatgtaatcttaggtaaa
cttatccctgctggaacaggtatgaaagtttataaatcaatcgaaattgattatgaaaca
atggaagaagaagatagacttatggaagaggcacttcttgaagaaaataaaactgaagaa
gtagaagattctaatgaaactgaagaaacagtaaaagaaactgaagaaacagtaaaagaa
actgaagaagttaaagaagttgaaacagtagaagaatag
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