Parvimonas parva: GAI15033_04730
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Entry
GAI15033_04730 CDS
T10920
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppag Parvimonas parva
Pathway
ppag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GAI15033_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppag03400
]
GAI15033_04730
Enzymes [BR:
ppag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GAI15033_04730
DNA repair and recombination proteins [BR:
ppag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GAI15033_04730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
PIF1
nSTAND3
HHH_5
NAT10_TcmA_helicase
AAA_22
DEAD
AAA_29
RsgA_GTPase
AAA
NTPase_1
AAA_28
SLFN-g3_helicase
UvrD-helicase
YNR034W-A-like
SRP54
ABC_tran
AAA_12
T15H9-4_C
NPHP3_N
MeaB
Thymidylate_kin
AAA_14
T2SSE
AAA_17
HHH_3
AAA_5
RNA_pol_A_CTD
AAA_18
CbiA
AAA_16
cobW
AAA_24
nSTAND_NTPase5
ATP-synt_ab
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
BFT65897
LinkDB
All DBs
Position
472180..474399
Genome browser
AA seq
739 aa
AA seq
DB search
MKVTGEVIKVRYVNEENGYSVFDLNTTDGELKIVGIFDSINVGETLEIEGEFTYDNKYGE
QLNMSSYEKKLPSSVAEIERYLASGIISTIGPKNARFIVEEFGKKSLDIVFDETDRLIEV
RGIGKKSIEKIKKSVEELRFSKNILFHLSGLGISLSLSKKIYSIFRENTLEIINENPYKL
IKNVKGIGFLKADEIALKNNLNKNSPYRIESAILYVLTQKAINFGHVYYPKDKLTLEVSK
LINVETDLIEPVYMNLLLSSDIVIDNSFEETNIYLDYLYVSESYVASKLAKTALNEDMEI
LFDVDSEIKKSLKDLSIKLSKIQIDAIKSCFEENVTIITGGPGTGKTTIINTIAKIFMNN
GYNISLCAPTGRASKRIEETTGFEAKTIHRMLGYIPSSYDDIGHFEYNEDNPLDTDLIII
DEMSMVDIVLFEKLLRGIKDSTKLIIVGDVDQLPSVGSGNVLRDLINSEKIKYTKLVDIF
RQSENSNIIVNAHKINNGQEPILNEKNSDFFFLKTESPMRTRNIVVDLISKRLPKAYGYN
FSKDIQILTQSRKGICGVMELNRLLQDILNPKTETSDELLVGNKIFRVNDKVMQTKNNYN
LSFLDSDGEEAFGVYNGDMGHIIFIDKSSKKVTVEMDDKREIEYSLEDLDNLELAYAITI
HKSQGSEFKAVIIPMFDGYRLLQTRNLLYTAITRAKENIVLVGDKNVMNNMIQNNTINSR
YSNLENRIKHFFGLVEELL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaacaggagaagttataaaggttagatatgtaaatgaagaaaatggatattcc
gtttttgacttgaatacaactgatggagaattgaaaattgtaggtatttttgattcaatt
aacgttggagaaactttagaaatagagggagaatttacatacgataataaatatggcgaa
caattaaatatgtcttcttacgaaaagaaacttccaagctctgttgctgagattgaaaga
tatttagccagcggtattatttcaacgattggtccaaagaatgcaagatttatagttgaa
gaatttggaaagaagagtttggatattgtctttgatgaaactgatagattgattgaagtt
agaggaatcggaaagaaaagtatcgaaaaaataaaaaaatccgttgaagaattaagattt
agtaaaaatattttatttcatcttagtggacttggaataagccttagtttatccaaaaaa
atttatagcatctttagagaaaatactttagaaattattaatgaaaatccatataagctg
attaagaatgtaaagggaattggatttttgaaagctgatgagattgctttgaaaaacaat
ttgaataaaaatagtccatacagaattgaatcggcgatactttatgttttaactcaaaaa
gctattaatttcggtcatgtttattatccgaaagataaacttactcttgaagtgtctaag
ttgattaatgttgaaacagaccttattgagcctgtttatatgaacttactcttatcttct
gatattgttattgataattcttttgaagaaacaaatatttatttagattatctttatgtt
tcggaaagttatgttgcaagtaaacttgcaaaaacggctttaaatgaagatatggaaatt
ttatttgatgttgatagtgaaataaaaaaatctttaaaagatttatccataaaactatca
aaaattcaaattgatgcaataaaatcttgttttgaagaaaatgttacaataataaccgga
ggacccggtaccggaaagactacaataataaatacaatagcaaaaatatttatgaataat
ggatataatatatctctttgcgctcctactggaagagcgtctaaaagaattgaagaaacg
acaggttttgaggcgaaaacaattcacagaatgttaggatatattccaagtagttatgat
gatattggacattttgaatacaacgaagataatcctttagatacggatttaatcataatt
gacgaaatgagtatggttgatatcgtactttttgaaaaacttctaagaggaataaaggac
agtacaaagttaattatagttggagatgttgaccagttgccaagtgttggctcaggtaat
gttttaagggatttgataaattcagaaaaaataaaatatacaaagttagttgatattttt
agacagtctgaaaatagcaatataatagttaatgcacataaaataaataacggacaagaa
ccgattttaaatgaaaaaaatagtgattttttctttttaaaaactgaaagtccgatgcga
actagaaatatagttgtggatttgataagtaaaagacttccaaaggcttatggttataat
ttttctaaagatattcagattttaactcaaagcagaaaaggtatctgtggagttatggag
ttgaataggttattacaggatattttaaatccaaaaactgaaacaagtgatgagcttttg
gttggaaataaaatttttcgtgtaaatgataaagttatgcagactaagaacaattacaat
ctttcttttttggactccgacggagaagaggcttttggagtttataacggagatatggga
catataatttttatagataaatctagtaaaaaagttacggttgaaatggacgataaaaga
gaaattgaatatagtttggaagatttggataatttagaacttgcctatgcgataactata
cataagtcgcaaggttctgagtttaaagctgtaatcattcctatgtttgacggatataga
ttacttcaaaccagaaatttattatatactgcaataactagagctaaagaaaatattgtt
ttggttggagataaaaatgttatgaacaatatgattcaaaacaatacgataaacagtaga
tattcaaatttagaaaatagaattaaacacttttttggacttgtagaggaattgttgtaa
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