Parvimonas parva: GAI15033_07360
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Entry
GAI15033_07360 CDS
T10920
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppag Parvimonas parva
Brite
KEGG Orthology (KO) [BR:
ppag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppag03016
]
GAI15033_07360 (truB)
Enzymes [BR:
ppag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GAI15033_07360 (truB)
Transfer RNA biogenesis [BR:
ppag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GAI15033_07360 (truB)
Prokaryotic type
GAI15033_07360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BFT66160
LinkDB
All DBs
Position
complement(750687..751577)
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AA seq
296 aa
AA seq
DB search
MNFNGILNVYKPKGFTSRDIVNIVRKIYKTKKVGHAGTLDPNATGVLPIAIGSATKLVDY
IQTMGKSYIGEMALGINTDTLDIWGKSIESKEISLDKNKFFEVIKKYDNKKIMQLPPMYS
ALKKDGKRLYEYARAGIEVEREEREVEIYSLIILNFYENKIRFEVSCSKGTYIRTLFNDI
ASDTNNLSYMSSLCRNKYGMFKIEDSYSLERLKTFNEDELQKTLTKIEDIFQYERIDFDK
KYFKHISNGLRKTFDIDREGIFKIYCNNIFIGIGELISAEDKKLLKMKNIFYKSNE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaacggaatattaaatgtatataaaccgaaaggatttacaagtagagatatt
gtaaatatagttagaaaaatttataaaacaaagaaagttggacacgcaggaactcttgac
cctaatgcaaccggagttttgcccattgctattggaagtgcaacaaaacttgttgattat
attcaaactatgggaaagagttatattggagaaatggctttaggaataaataccgatact
ttggatatatggggtaaaagtattgagtctaaagaaatttctttagataaaaataaattt
tttgaagttataaaaaaatatgataataaaaaaattatgcaattaccaccgatgtattct
gctttaaagaaagacggaaaaagattatatgaatacgcaagagcaggaatagaagttgaa
agagaagaaagagaagtagaaatatattctttaataattcttaacttttatgaaaataaa
atacgttttgaagttagttgttcaaaaggaacatatattcgtactttatttaatgatatt
gcatcagatacaaataatttatcatatatgagctctctttgtagaaataaatacggaatg
tttaagattgaagattcatattcattggaaaggcttaaaacttttaacgaagatgaactt
caaaaaactttaacaaagatagaagatatttttcaatatgaaagaatagattttgataaa
aaatatttcaaacacatttcaaatggacttagaaagacttttgatatagatagagaggga
atttttaaaatctattgcaacaatatttttattggaattggggaactaatttcagcagaa
gataaaaaacttttaaaaatgaaaaatatattttataaatcaaatgaataa
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