Paraburkholderia pallida: E1956_00130
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Entry
E1956_00130 CDS
T09864
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ppai
Paraburkholderia pallida
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppai03036
]
E1956_00130 (xerD)
Chromosome and associated proteins [BR:
ppai03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
E1956_00130 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QBQ98427
UniProt:
A0A4P7CTG4
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All DBs
Position
1:complement(32981..33931)
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AA seq
316 aa
AA seq
DB search
MPGAPDSGEATALAPAAAQALATSLLAIDTFCDAIWLEHGLSRNTLDAYRRDLRLFAEWL
AHARSRGLDAVHEDDLLAYSARRKDDKSTSANRRLSVFRRYYGWALREQRVSADPTVRVR
SAKQGPRFPSTLTEAQVEALLNAPDVATPLGLRDRTMLELMYASGLRVTELVTLKTVEVG
LNEGVVRVLGKGSKERLIPFGEEAAAWITRYLREARPALLGARTTDALFVTARAEGMTRQ
QFWHIIKRHALNAGVHAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHV
ARERLRLLHEMHHPRG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgcgccggacagcggcgaggcaaccgcgcttgcaccggccgccgcgcaggcg
ctcgccacgagcctgctcgccatcgacacgttctgcgacgccatatggctcgagcacggt
ctctcgcgcaatacgctcgacgcctaccggcgcgatctgcgcctgttcgccgagtggctt
gcgcacgcgcgctcgcgcggcctcgacgcggtccacgaggacgacctgctcgcctacagt
gcgcgccgaaaggacgacaagtcgacctccgcgaaccggcgtctttcggtcttccggcgc
tactacggctgggcgctgcgcgagcagcgcgtgagcgcggacccgacggtgcgcgtgcgc
tcggcgaagcaggggccgcgctttccttcgacgctcaccgaagcgcaggtcgaggcgctg
ctgaacgcgcccgacgtggccacgccgctcggtctgcgcgaccgcacgatgctcgagctg
atgtacgcgagcggcttgcgcgtgactgagctcgtcacgctcaagacggtcgaggtgggc
ctgaacgaaggtgtcgtgcgcgtgctcggcaagggctcgaaggagcggctgattccgttc
ggcgaagaggcggcggcctggatcacccgctatctgcgcgaggcgcggcccgcgctgcta
ggcgcacgcactaccgatgccctgttcgtcaccgcgcgcgccgaaggcatgacgcgacag
cagttctggcacatcatcaagcgccacgcgctcaatgcgggcgtgcacgcgccactctcg
ccgcacacgctgcgccatgcgttcgccacgcatctgctcaatcacggcgcggacctgcgc
gtcgtgcaactgctgctcggccatagcgacatctccacgacgcagatctacacgcacgtc
gcgcgcgagcgcctgcggctcctgcacgagatgcatcatccgcgcgggtag
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