Paraburkholderia pallida: E1956_01285 Help Entry E1956_01285       CDS       T09864                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism ppai  Paraburkholderia pallida Pathway ppai02020   Two-component system ppai02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ppai00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     E1956_01285  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     E1956_01285  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ppai03021]     E1956_01285 Transcription machinery [BR:ppai03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      E1956_01285 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_Crp_2 HTH_23 Motif Other DBs NCBI-ProteinID:  QBQ95943 UniProt:  A0A4P7CQH0 LinkDB All DBs Position 1:310937..312454 Genome browser AA seq 505 aa AA seqDB search MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVATAISQNPLLENEDDWIASPLRV AADGSVIAQPPTPSGAEPMQGADHGTSSSGSSSESGEGEPRGVDEYDGLSGDANGEASQW NLDDYGRSGSASDDDDLPPLQIHESTTTLRDHLMAQLRETNASQRDRALITFLIESLDED GYLSATCEEILADIPEELEVDADELNAALALLHSFDPAGVGARSASECLKLQLLRVNSSP TRTLALEIVSNHLELLAARDFTRLRKQLKTGDDELRDAHTLIRSLEPFPGAAYGKAEADY VVPDIIVKKTGQNWHAELNPEVVPKLRINHLYANILRNNRGDPGSGSLRQQLQEARWLIK NIQQRFETILRVAQAIVERQKNYFVHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYML TPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAENTKSPLSDSRIAELLAEQGF VVARRTVAKYREALKIPAVNLRKSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgaaagccagcctccaactccgcctctcgcagcatctcgcgctgaccccgcagctacaa cagtcgatccggctgctgcagctgtcgacgctcgaactgcagcaggaggtcgccacggcg atctcgcagaaccctctgctcgagaacgaggacgactggatcgcgagcccgctgcgcgtg gcagcggacggctcggtcatcgctcagccgcccacgccctctggcgccgagccgatgcaa ggcgcggaccacggcacgtcgtcgtcgggcagcagcagcgaaagcggcgaaggcgagccg cgtggcgtggacgaatacgacggcctcagcggcgacgcaaacggcgaggccagccagtgg aacctcgacgactacggccgctccggcagcgcctccgacgacgacgacctgccgccgctg caaatccacgaatcgaccaccacgctgcgcgaccatctgatggcgcaactgcgcgagacg aatgcgagccagcgcgatcgcgcgctcattacgttcctgatcgaatcgctcgacgaagac ggctacctctcggcgacctgcgaggaaatcctcgccgatatcccggaagagctggaagtc gatgccgacgagctgaatgcggcgcttgcgctcctgcacagcttcgacccggcgggcgtg ggtgcgcgctcggcgtcggagtgcctgaagctgcaattgctgcgcgtcaattcgtcgcct acgcgcacgctcgcgctcgagatcgtgtcgaaccatctggaattgctcgccgcacgcgac ttcacgcgcttgcgcaagcaactgaagaccggcgacgacgaattacgcgatgcgcatacc ttgatccgctcgctcgagccgtttccgggcgcggcgtacggcaaggctgaagccgactac gtggtgccggacatcatcgtgaagaagacgggccagaactggcacgccgagctcaatccg gaagtggtgccgaagctgcgcatcaatcacctgtacgccaacatcctgcgcaacaaccgg ggcgacccgggcagcgggtcgctgcggcagcagttgcaggaagcgcgctggctcatcaag aacatccagcagcgtttcgagacgatcctgcgcgtcgcgcaggccatcgtcgagcgtcag aagaactatttcgtgcacggcgagattgccatgcgccccttggttttgagggagattgct gatacgctgggcctacacgaatcaactgtctcgcgtgtgacaaccggtaaatacatgctg actccattcgggacacttgaatttaagtacttcttcggatcgcacgtttcaacggacacc ggtggcgccgcatcgtctaccgccatccgcgcccttatcaagcaactcataggagccgag aacaccaaatcccctctttcggacagccgcatagccgaactgctggcggaacagggtttc gtggtcgcgcgacgcaccgtcgcgaaataccgtgaagcgctgaagattccggcggtcaat ctgcgcaagtctctttaa

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