Paraburkholderia pallida: E1956_01320
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Entry
E1956_01320 CDS
T09864
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppai
Paraburkholderia pallida
Pathway
ppai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E1956_01320 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_01320 (mutM)
Enzymes [BR:
ppai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E1956_01320 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E1956_01320 (mutM)
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E1956_01320 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Auto_anti-p27
DUF5817
Motif
Other DBs
NCBI-ProteinID:
QBQ95949
UniProt:
A0A4P7CPV2
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All DBs
Position
1:complement(317734..318564)
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPWVAGRRVERVDVRNPALRWPVPDTLARTLRGRTIRSVGRRGKYL
LFEVDEGWFIVHLGMTGTLRVLRNLPKPPAAEKHDHVDWLFDDFTLRFRDPRRFGAVLWH
PREAGDVLGHPLLANLGIEPFTSAFSGALLFRETRGRKVAVKQALLAGDIVVGVGNIYAS
ESLFRAGIRPTTAAGRVSLARYELLADAVRAVLASAIEKGGSTLRDFVGSNGESGYFQLE
YFVYDRAGQPCRVCGTPIKQIVQGQRSTYFCPRCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgccagaagttgaagttacccgcaggggcatcgagccgtgggtcgcgggc
cgccgtgtcgagcgcgtcgacgtgcgcaatccggccctgcgctggcctgtgccggacacg
ctcgcacgcacgctgcgtggccgcacgatccgttccgtgggccgacgaggcaagtatctg
cttttcgaggtcgatgagggctggttcatcgtccatcttggcatgaccggcacgctgcgc
gtgttacgtaatcttccaaagccgcccgcggccgagaagcacgatcacgtcgactggctc
ttcgacgacttcacgctgcgttttcgcgatccgcgccgctttggcgccgtgctctggcat
ccgcgcgaggcgggcgacgtgctcggccatccgctgcttgcgaatctcggcatcgagccg
ttcacgagcgcgttctcgggcgcgctgctgtttcgcgagacgcgtggccgcaaggttgcc
gtcaagcaggcgctgctcgccggcgacatcgtggtgggcgtgggcaatatctacgcgtcg
gaaagtctttttcgcgcgggcatccggccgaccacggccgcgggccgcgtctcgctcgcg
cgctacgaattgctcgcggacgccgtgcgcgccgtgctggcctcggcgatcgagaagggc
ggcagcacgttgcgcgacttcgtcggcagcaacggcgagagcggctactttcagctcgaa
tatttcgtttatgaccgcgcgggccagccctgccgagtatgtggcacgccgatcaagcag
atcgtgcagggccagcggtccacttatttctgtccgcgctgtcagcgctga
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