Paraburkholderia pallida: E1956_08100
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Entry
E1956_08100 CDS
T09864
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ppai
Paraburkholderia pallida
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppai01011
]
E1956_08100
Enzymes [BR:
ppai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E1956_08100
Peptidoglycan biosynthesis and degradation proteins [BR:
ppai01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E1956_08100
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
DUF6692
DUF6491
Motif
Other DBs
NCBI-ProteinID:
QBQ97139
UniProt:
A0A4P7CT08
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All DBs
Position
1:1778405..1780057
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AA seq
550 aa
AA seq
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MRFILSALLVLMLAACASGGPAANSANSLAPADPQARADAIRKTSAAKETINVDQGSVDQ
LTSPDADLWGRIRRGFQMPDLQSDLVDMNAQWYAERPDYVARMTERSQKYLYHIVEELEA
RHMPTELALLPFIESAYNPQALSVAKAAGMWQFVPGTGRTYNLKQNMWQDERRDVLASTS
AALDYLSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYQSLRMPNETRNYVP
KLQAVKNIVMNPQQYGLTLPSIPNHPYFVTVTTSHDIDVDVAAKLANMTPDEFRSLNPSF
KKPVILGATDPQILLPFDNASAFERNLKSYSGQLSSWTVYTTDSRTTPSAIAQKIGVDAD
TLMSVNKIPAGMRLKAGSTLVVPRTDDGDDEDISADVAESAVLAMEPDVPDTRKMLIRVR
RKQSMDAVAGRYGVSVGQLKAWNKTRRDLVTPGQVLVLHVPVGKAMPSEPGPERLAANVS
GGGVERIGTRVADTGSKSRYDKKHGRARTEVVKVSEPVKEKASGAAPSKASKGAASRPKA
ETHTQKHKPK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttatcctaagcgcgctgctggttctcatgctcgccgcctgtgcgagcggggga
cctgctgcgaattcagccaactcgcttgccccagcagatccccaggcgcgcgccgacgcc
atccgcaagacctccgcagcgaaagaaaccatcaacgtcgaccagggctcggtcgaccag
ctcacgagtcccgacgccgacttgtggggtcgaatccgccgcggcttccagatgcccgac
ctgcagagcgatctggtcgacatgaacgcccagtggtatgccgagcgtcccgactacgtc
gcgcgcatgaccgagcggtcgcagaaatatctgtaccacatcgtcgaggagctcgaggcg
cgccatatgccgaccgagcttgcgctgctgccgttcatcgagtccgcgtataacccgcag
gcgctgtcggtcgcgaaggcggcgggcatgtggcagttcgtgcccggcacgggccgcacc
tataacctgaagcagaacatgtggcaggacgagcgccgtgacgtgctcgcctccaccagc
gcggcgctcgactatctgtcgcgcctgcatgacatgttcggcgactggtatctggcgctc
gcggcctacaactggggcgagggcaatgtgcagcgcgccatcgcgcgcaaccaggcggcc
ggtctgccgaccgactatcagagcctgcgcatgccgaatgagacacgtaactacgtgccc
aagctgcaggcggtcaagaacatcgtgatgaacccgcagcaatacgggctcacgttgcct
tcgattcccaaccacccgtatttcgtcacggtcacgacgtcgcacgatatcgacgtggac
gtcgcggccaagctcgcgaacatgacgcccgacgagttccgctcgctcaacccgtcgttc
aagaagccggtcattctcggcgcgaccgacccgcagatcctgctgccgttcgacaacgcg
agtgccttcgagcgcaacctcaagtcgtattcgggccagctttcctcgtggaccgtctac
acaaccgactcgcgcacgacgccgtcggcgatcgcgcagaagatcggcgtggatgcggac
acgctcatgtcggtcaacaagatcccggcgggcatgcgcctgaaggcgggctcgacgctc
gtggtgccgcgcaccgacgacggcgacgacgaggacatcagcgccgacgtcgccgaaagc
gccgtgctggccatggagccggacgtgcccgacacgcgcaagatgctgattcgcgtgcgt
cgcaagcagtcgatggatgcggtcgcggggcgctatggcgtctcggtcggccagctcaag
gcctggaacaagacgcgccgcgacctcgtgacgcctggccaggtgctcgtgctgcacgtg
ccggtcggcaaggcgatgccgagcgagccggggccggagcgtctggcagccaatgtgtcc
ggtggcggcgtggagcgcatcggcacccgggttgcagacacgggttccaagtcgcgctac
gataagaaacacggtcgcgcgcgcaccgaggtcgtcaaggtttccgagccagtcaaggaa
aaggcttccggcgcagcgcccagcaaggcgtcgaagggtgcggcaagccgcccgaaggcc
gaaacccacacgcagaagcacaaacccaaatag
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