Paraburkholderia pallida: E1956_08380
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Entry
E1956_08380 CDS
T09864
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ppai
Paraburkholderia pallida
Pathway
ppai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E1956_08380 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_08380 (uvrB)
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E1956_08380 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E1956_08380 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QBQ97189
UniProt:
A0A4P7CT54
LinkDB
All DBs
Position
1:1843120..1845201
Genome browser
AA seq
693 aa
AA seq
DB search
MSDHTVADAPALDESKFVQYDGSPFQLYQPYLPAGDQPTAIETLIEGVEDGLSFQTLLGV
TGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRQGDRIGQRDVIARLIAMQYTRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRLELFDDE
IETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAVETIKSELRERLEFFHTEGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGALPGEPPPTLVDYLPTDAMMFLDES
HVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADYE
KKVTGQIAEQVVRPTGLVDPVIEVRPAATQVDDVLGEINERVAVGERVLVTTLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKAILYGDRITDSMRRAIDETERRRAKQMAFNEE
HGIVPRGVVKRIKDIIDGVYNVDDARAVLREEQERAKFEDMNEKQIAKEIKKLEKQMMDY
AKNLEFEKAAQTRDQLAVLRRRVFGANVDDHPA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccacaccgtcgccgacgcgcccgcgctcgacgagtcgaagttcgtccagtac
gacggctcgccattccagctctaccagccgtacctgccggccggcgaccagccgaccgcc
atcgaaacgctcatcgagggcgtggaggacggtctctcgtttcagaccctgctgggcgtg
acgggctcgggcaagacctacacgatggccaacaccatcgcgcggctgggccgcccggcc
atcgtattcgcgccgaacaagacgctcgccgcgcagctttacgcggaattccgcgagttc
tttccgcgcaatgcggtcgagtacttcgtctcgtactacgactactaccagccggaagcg
tacgtgccgcagcgcgatctcttcatcgagaaggattcgtcgatcaacgagcacatcgag
cagatgcggctgtcggccaccaagagcctgatggagcgccgcgacgtggtgatcgtcgcg
accgtctcggcgatctacggtatcggcaatccgtccgagtaccaccagatgatcctgacg
ctgcggcagggcgaccgcatcgggcagcgcgacgtcatcgcgcgcctgatcgcgatgcag
tacacgcgcaacgagcaggatttccagcgcggcaccttccgcgtgcgcggtgacaccatc
gacatcttcccggccgagcacgccgaaatggccgtgcgcctcgagctcttcgatgacgaa
atcgagacgctgcagctgttcgatccgctcacgggccgcgtgcgccagaagattccgcgc
ttcacggtctatccgtcgtcgcactatgtgacgccgcgcgagaccgtgctgcgcgccgtc
gagacgatcaagtccgaattgcgcgagcgcctcgagttcttccacaccgagggcaagctc
gtcgaagcgcagcgcctcgagcagcgcacgcgcttcgacctggaaatgctccaggaactg
ggcttctgcaagggcatcgagaactactcgcggcacttctcgggcgcgctgcccggcgag
ccgccgcccacgctcgtcgattacctgcccaccgacgccatgatgttcctcgacgaatcg
cacgtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcgcgcaaggaaaac
ctcgtcgactacggcttccgtctgccttccgcgctcgataaccggccgctcaagttcaac
gagttcgagcgcaagatgcgccaggtagtgttcgtctcggctacgcccgccgactacgag
aaaaaggtcacgggccagatcgccgagcaggtggtgcgccccacgggcctggtcgacccg
gtgatcgaggtccgtccggccgccacccaggtcgacgacgtgctcggcgagatcaacgag
cgcgtggccgtgggcgagcgcgtgctggtgaccacgctcaccaagcgcatggccgagcag
ctcaccgagttcctcgccgatcacggcgtgaaggtgcgctatctgcatagcgacatcgat
acggtcgagcgcgtggagatcatccgcgacctgcgtcttggcaccttcgacgtgctcgtg
ggcatcaacctgctgcgcgagggcctcgacattcccgaggtgtcgctcgtggcgatcctc
gacgccgacaaggagggtttcctgcgcgccgagcgctcgctgattcagacgatcggccgc
gcggcgcgcaacgtgaacggcaaggcgattctctacggcgaccgcatcaccgactcgatg
cgccgcgcgattgacgaaaccgagcgccgccgggccaagcaaatggcgttcaacgaggag
cacggcatcgtgccgcgcggcgtggtcaagcgcatcaaggacatcatcgacggcgtctac
aacgtggacgatgcgcgcgccgtgttgcgcgaggagcaggagcgcgcgaagttcgaggac
atgaatgaaaagcagatcgcgaaggagatcaagaagctcgagaagcagatgatggactac
gcgaagaacctcgaattcgagaaggccgcgcagacgcgcgaccagctcgcggtgctgcgc
cggcgcgtgttcggggccaacgtggacgaccatccggcctga
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