Paraburkholderia pallida: E1956_09240
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Entry
E1956_09240 CDS
T09864
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppai
Paraburkholderia pallida
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppai03016
]
E1956_09240 (truB)
Enzymes [BR:
ppai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E1956_09240 (truB)
Transfer RNA biogenesis [BR:
ppai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E1956_09240 (truB)
Prokaryotic type
E1956_09240 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
UPF0113
Motif
Other DBs
NCBI-ProteinID:
QBQ97341
UniProt:
A0A4P7CSS4
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All DBs
Position
1:2039496..2040455
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AA seq
319 aa
AA seq
DB search
MTAPSKTPQGAPRPKVPRRLLDGVLLLDKPLGLSSNDALIRAKRLFRVKKAGHTGTLDPL
ATGLLPLCFGEATKFSQDLLDADKTYEATLRLGIRTATGDAEGEAIETREVRCDEAVVRE
AMAKFVGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRQVTILALEMIACALPDVTF
RVTCSKGTYVRTLAEDIGEALGCGAHLVMLRRTGVGALTLEHAVTLDALTAADEPARDAW
LQPVDALLSTFPAVTLNVEAARRFTHGQRLPLNELALDRTACEAADRVRVYGEEGRLLGV
AKAGNGVLAPERLVVSGSA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgactgctccttccaagactcctcaaggcgcgccccgaccaaaggtgccgcgccgcctg
ctcgacggcgtgctgctgctggacaagccgcttggcttatccagcaacgacgcgctgatc
cgcgcgaaacgcctctttcgcgtgaagaaggcgggccataccggcacgctcgatccgctc
gcgacgggcctcttgccgctgtgcttcggcgaggcgaccaagttctcgcaggacttgctc
gacgccgacaagacctatgaggcgaccctgcgcctcggcatccgcaccgcgacgggcgac
gccgaaggcgaagccatcgagacgcgcgaagtgcgttgcgacgaagccgtcgtgcgcgag
gcgatggcgaagttcgtcggcgagatcgtgcaggtgccgccgatgtattcggcgctcaag
cgcgacggcaagccgctctacgaatacgcacgcgcgggccagacggtcgagcgcgaaggg
cgccaggtgacgatcctcgcactggagatgattgcttgcgcgttgcccgacgtgacgttt
cgcgtcacctgcagcaagggcacctatgtgcggacgctggccgaggacatcggcgaggcg
ctcggctgcggcgcgcatctcgtgatgctgcggcgcacgggcgtgggcgcgctcacgctc
gagcacgccgtgacgctggacgcgctcacggccgccgacgagcctgcgcgtgacgcatgg
ctgcagcccgtggacgcgctgctttccacgtttcccgccgtgacgctgaacgtcgaggcg
gcgcgccggtttacgcatggccagcgcctgccgctcaatgagctcgcgctcgatcgcacg
gcatgcgaagcggccgatcgcgtgcgcgtctatggagaagaagggcgcttgctcggcgtg
gcgaaggcgggcaatggcgtgctcgcgccggagcggctggtggtgagcggctcggcttga
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