Paraburkholderia pallida: E1956_09970
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Entry
E1956_09970 CDS
T09864
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppai
Paraburkholderia pallida
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppai03000
]
E1956_09970
Transcription factors [BR:
ppai03000
]
Prokaryotic type
Helix-turn-helix
Other families
E1956_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
Mg_chelatase
PAS_4
HTH_23
HVO_A0261_N
HTH_30
AAA_2
HTH_28
DUF5810
HTH_29
HTH_20
AAA
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QBQ97468
UniProt:
A0A4P7CNV3
LinkDB
All DBs
Position
1:complement(2191272..2193284)
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AA seq
670 aa
AA seq
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MPYALAPTRHAERVRGAVEGRLPAPNDSPRLALSWQRSFERYQLDPGSVIGPRVLSAAEL
REIRDREEAFLRASGQCLTRLHETVRDADYCVMLTDAHGVTIDYRIDRERRNDFKHAGLF
MGSCWSESEEGTCGIASVLTDLAPITVHKTDHFRAAFTTLTCSAAPIFAPDGELIGVLDA
SAVQSPDNRDSQRIVNQLVRQSATLIEDGYFLHRTGACWILFGHQNRNYVEAQPEVLIAF
DENGNVAAANRRARECIPGLDGPRHIDEIFDSSHVQLRDIGRIEAIAALRLRANGSMLYA
RIRAPLGRAGFPGAPRSQAPAVHGATPLRDARAGDTDDRSALGPFLRSADARVAENARIA
QRVAGKHLPVLLLGETGAGKEVFARAIHDAGPRRNRPFVAVNCGALPESLIESELFGYAP
GAFTGARRHGARGKIAMADGGTLFLDEIGDMPLALQTRLLRVLAEGEVLPLGGETPTRVD
LDVICATHRDLAQMACAGAFREDLYYRLCGAVLILPPLRERRDVATLIETVFAEEAQAAG
RPLTLDAALAARLAAFAWPGNLRQLRNAMRYACAVCDTVRVEARHLSADLAAQLAAQNPA
VSASGLARAPSGAAMASDPAYDCGDERARIVAALTAHRWRPNAAAAALGMSRATLYRRIT
KLGIVGPHRA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgcactcgcgcccactcgccacgccgaacgcgtacgcggcgccgtcgaaggc
cggctgcccgcgccgaacgactcgccgcgcctcgccctgtcgtggcagcgctcgttcgag
cgctatcagctcgatcccggctcggtgatcggcccacgtgtgctgagcgcggccgagttg
cgcgagatccgcgatcgcgaagaggctttcctgcgcgcctcgggccaatgcctcacgcgc
ctgcacgagaccgtgcgcgacgccgactattgcgtgatgctcaccgacgcgcacggcgtc
accatcgactaccgcatcgaccgcgagcgccgcaacgacttcaagcatgcgggcctcttt
atgggctcgtgctggtcggagagcgaggaaggcacgtgcgggatcgcgagcgtgctcacc
gacctcgcgcccatcacggtgcacaagaccgatcactttcgcgccgcgttcacgacgctc
acgtgcagcgccgcgcccatcttcgcgcccgatggcgagctgataggcgtgctcgatgcc
tctgccgtgcagtcgcccgacaaccgtgacagccagcgcatcgtcaaccagctcgtgcgc
cagagcgcgacgctcatcgaagacggctatttcctgcatcgcaccggcgcgtgctggata
ctcttcggacaccagaaccgcaactacgtcgaggcgcagcccgaagtgctgatcgccttc
gacgagaacggcaacgtggccgccgcgaaccgccgcgcgcgcgagtgcattccgggcctc
gacggtccgcgccatatcgacgagatcttcgattcatcgcatgtgcagctgcgcgatatc
ggccgtatcgaagccatagcggcgctgcgcctgcgtgcgaacggcagcatgctttacgcg
cgcattcgcgcgccgctcggccgcgcggggttccccggtgcgccacgcagccaggcaccc
gccgtgcacggcgcgacgccgctgcgtgatgcgcgtgccggcgacaccgacgatcgcagc
gcgctgggcccgttcctgcgcagcgcggatgcgcgcgtggccgaaaacgcgcgcatcgcg
cagcgcgtggcaggcaagcatctgccggttctgctgctcggcgaaacgggcgcgggcaag
gaagtgttcgcgcgagcgatccacgacgcggggccgcggcgcaaccggccattcgtggcc
gtgaactgcggtgcgctgcccgaatcgctgatcgagagcgagctcttcggctacgcaccg
ggcgcattcacgggcgcgcggcgccatggcgcgcgcggcaaaatcgccatggccgacggc
ggaacgctgtttctcgatgagatcggcgacatgccgctcgcgctgcaaacgcgcctcctg
cgcgtgctcgccgaaggcgaggtgctgccgctcggcggcgaaacacccacgcgcgtggac
ctggacgtgatctgcgcgacgcaccgcgacctcgcgcaaatggcctgtgcgggcgcgttc
cgcgaagacctctactaccggctctgcggcgccgtgctcatcttgccgccgctgcgcgag
cgccgcgatgtcgcaacgctgatcgaaaccgtgtttgccgaagaggcccaagcggccggc
cgcccgctcacgctggacgccgctctggctgcacggctggccgcattcgcctggcccggc
aacctgcgccagttgcgcaacgccatgcgctacgcatgcgcggtgtgcgatacggtgcgc
gtcgaggcgcggcatttgagcgccgatctcgcggcgcaactagcagcgcaaaatccggcc
gtcagcgcctccggcctggctcgcgcaccttcgggcgccgccatggccagcgatcctgcc
tacgattgcggcgacgaacgcgcacgcatcgtcgccgcactcaccgcacatcgctggcgc
cccaacgccgctgccgcggcgcttggcatgtcgcgcgcgacgctttatcggcgcattacg
aaactcggcatcgtcgggccccaccgcgcctga
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