KEGG   Paraburkholderia pallida: E1956_12265
Entry
E1956_12265       CDS       T09864                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ppai  Paraburkholderia pallida
Pathway
ppai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E1956_12265 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppai03400]
    E1956_12265 (xth)
Enzymes [BR:ppai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     E1956_12265 (xth)
DNA repair and recombination proteins [BR:ppai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     E1956_12265 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Allatotropin-like_C
Other DBs
NCBI-ProteinID: QBQ97874
UniProt: A0A4P7CUL1
LinkDB
Position
1:2708359..2709144
AA seq 261 aa
MKIATWNVNSLKVRLQHVIDWLGQSNADVLCLQELKLTDDKFPRAELEAQGYRSWFTGQK
TYNGVAILVRDGLAVDEATVVRNIPGFEDPQQRVIAVTVEGVRIVSAYFPNGQAPGSEKF
AYKLNWLNALHDWLIVEMQQHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAQFQ
RLIALGFVDAYRQFEQPEKMFSWWDYRMFAFRRNAGLRIDHILLSPTLAPSLVSSEIDKV
PRKWEQPSDHTPVVADLTIAG
NT seq 786 nt   +upstreamnt  +downstreamnt
atgaaaatcgccacctggaacgtcaactccctgaaggtccgtctgcagcacgtcatcgac
tggctcgggcagagcaacgccgacgtgctctgccttcaggaactcaagctcaccgacgac
aagttcccgcgcgccgaactcgaagcacaaggctatcgcagctggttcacgggccagaag
acctataacggcgtggccatcctcgtgcgcgacggcctcgccgtcgacgaggccacagtc
gtgcgcaacatccccggcttcgaggacccgcagcagcgcgtcattgccgtcacggtggaa
ggcgtgcgcatcgtcagtgcgtacttccccaacggccaggcgcccggctccgagaagttc
gcctacaagctgaactggctgaacgcgctgcacgactggctcatcgtggagatgcagcag
catccgaaactcgcgctgctcggcgattacaacattgcgccggaagaccgcgacgtgcac
gatcccaaagcctgggagggccagaacctcgtctcgcccgaagagcgcgcgcagtttcag
cgcctcatcgcgctcggcttcgtcgatgcgtaccgccaattcgagcagcccgaaaagatg
ttctcgtggtgggactatcgcatgttcgcattccgccgcaatgcggggctgcgcatcgac
cacatcctgctctcgcccacgctcgcgccttcgctcgtgtcgagcgagatcgacaaggtg
ccgcgcaagtgggaacagccgtctgaccacacgccggtcgtggccgatctgacgattgcg
ggctaa

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