Paraburkholderia pallida: E1956_12850
Help
Entry
E1956_12850 CDS
T09864
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppai
Paraburkholderia pallida
Pathway
ppai03420
Nucleotide excision repair
ppai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E1956_12850
03430 Mismatch repair
E1956_12850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_12850
Enzymes [BR:
ppai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E1956_12850
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E1956_12850
MMR (mismatch excision repair)
Other MMR factors
E1956_12850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QBQ97976
UniProt:
A0A4P7CTA6
LinkDB
All DBs
Position
1:complement(2835575..2837953)
Genome browser
AA seq
792 aa
AA seq
DB search
MPELLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGLASPMTILAVTF
TNKAAREMMSRLQAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKGLNIDDEKYPPKNLQYFINNAKEQGLRPKDVDVTDDFNRKFVELYEAYDQQCQR
EGVVDFAELLLRCYELLAYNPPLRAHYQARFRDILVDEFQDTNKLQYAWLKLLAGPGNAI
FAVGDDDQSIYAFRGANVGNMRDFENEFRVKHMIKLEQNYRSHGHILDAANYLIAHNSRR
LGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEVRALINQGLARNEIAILYRSNAQSRTI
EHTLVNAGVPYKVYGGLRFFERLEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVTGKAGSSLGSFANLIAKMRAETAQMSLPEAVEYTVRMSG
LAEFYQNEREGQDRLENLQELVTAATAFVSEQGYGMDTPARSIPLRPGASTAPEIVSQDG
EIEVLDAPAITDPAQNPDLMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFT
AVFITGLEEGLFPHENSAMEADGLEEERRLMYVAITRAKERLYISFAQSRLLHGQTRYNV
RSRFFDELPQETLKWLTPKVEAGSRWGGRSDNAGWGRDWFARPGGGDGNGGGGRRERDAY
IADKSPAPAFANEQRAAETGFRVGQAVFHTKFGEGTITALEGSGTDAKAQVRFKRHGEKW
LALAVAKLQAVE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgctcgcgaacctgaaccccgaacaacacgccgccgtcacgttgccgaat
gaaccggcgctcattctggccggggccggcagcggcaagacgcgcgtgctgatcacgcgc
attgcgtggctcatccagcagggcctcgcctcgccgatgacgatcctcgccgtgaccttc
acgaacaaggccgcgcgcgaaatgatgagccgccttcaggcgatgatgcccatcgacacg
cgcggaatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcattac
cgcgacgccggcctgccgcagaccttccagatcctcgacacggccgaccagctctcggcc
atcaagcgtctgatgaagggcctgaacatcgacgacgagaaatacccgccgaagaacctg
cagtacttcatcaacaacgcgaaggagcaaggcctgcggccgaaggacgtcgacgtcacg
gacgacttcaaccgcaagttcgtcgagctctacgaagcctacgaccagcagtgccagcgc
gagggcgtggtcgacttcgcggagctgctgctgcgctgctacgagctgctcgcgtacaac
ccgccgctgcgcgcgcactatcaggcgcgctttcgcgacatcctcgtcgacgagttccag
gacaccaacaagctccagtacgcgtggctcaagctgctcgcgggtccgggcaacgcgatc
ttcgccgtgggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgagaacgagttccgcgtgaagcacatgatcaagctggagcagaactat
cgttcgcatggccatattctcgatgcggcgaactacctgatcgcgcataactcccggcgt
ctgggcaagaacctgcgcaccgatgcgggccatggcgagccggtgcgcgtctacgaggcg
gccaccgactcgcaagaagcgggctggatcgtcgaggaagtccgcgcgctgatcaatcag
ggcctcgcgcgcaacgagatcgcgattctgtaccgaagcaacgcgcagtcgcgcacgatc
gagcacacgctcgtgaacgcgggcgtgccgtacaaggtgtatggcggcctgcgcttcttc
gagcgcctggaagtgaagcacgcgctcgcgtatctgcgcctgatcgacaaccccaacgat
gacaccgcgttcgcgcgcgtcgtgaacttcccgacccgcggcatcggggcgcgctcgatc
gagcagctcgccgatgccgcgcgcctctacaactgctcgatggcggcggccattccctac
gttacgggcaaggccggctcgagcctcggttcgttcgcgaacctgatcgcgaagatgcgc
gccgaaaccgcgcagatgagcctgcccgaagccgtcgagtacacggtgcgcatgagcggc
ctggccgagttctatcagaacgagcgcgagggccaggaccgtctggagaacttgcaggaa
ctcgtgacggcggccaccgcgttcgtgagcgagcaaggctacggtatggacacgcccgcg
cgttcgattccgctgcgcccgggcgcgagcacggcgccggagatcgtttcgcaggacggc
gagatcgaagtgctggacgcgcccgcgatcacggatcccgcgcagaaccccgacctcatg
acgccgctcgcgggcttcctctcgcatgcgtcgctcgaggcgggcgacaaccaggcgcag
gcgggccaggacgccgtgcaactgatgaccgtgcacgcggcgaagggcctcgagttcacg
gcggtgttcatcaccggtctcgaagagggcctgttcccgcacgagaacagcgcgatggaa
gccgatggcctcgaagaggagcgccgcctgatgtacgtggcgatcacgcgcgcgaaggag
cggctctatatctcgtttgcgcaaagccgcttgctgcacggccagacgcgctacaacgtg
cgctcgcgcttcttcgacgagctgccgcaggagacgctcaagtggctcacgcccaaagtc
gaagcgggctcgcgctggggcggccgttccgacaacgccggctggggccgcgactggttc
gcgcgtccgggcgggggggatggcaacggcggcggtggccgccgcgagcgcgacgcctat
atcgcggacaagagccccgcgcccgcgttcgccaacgagcagcgcgcggccgagacgggc
ttccgcgtgggccaggccgtgttccacacgaagttcggcgaaggcacgatcacggcgctc
gaaggcagcggcaccgacgccaaggcgcaggtgcgcttcaagcgccacggcgagaagtgg
ctcgcactggccgtggcgaagctgcaggcggtggagtga
DBGET
integrated database retrieval system
