KEGG   Paraburkholderia pallida: E1956_15590
Entry
E1956_15590       CDS       T09864                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ppai  Paraburkholderia pallida
Pathway
ppai03030  DNA replication
ppai03410  Base excision repair
ppai03420  Nucleotide excision repair
ppai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E1956_15590 (polA)
   03410 Base excision repair
    E1956_15590 (polA)
   03420 Nucleotide excision repair
    E1956_15590 (polA)
   03440 Homologous recombination
    E1956_15590 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppai03032]
    E1956_15590 (polA)
   03400 DNA repair and recombination proteins [BR:ppai03400]
    E1956_15590 (polA)
Enzymes [BR:ppai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E1956_15590 (polA)
DNA replication proteins [BR:ppai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     E1956_15590 (polA)
DNA repair and recombination proteins [BR:ppai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     E1956_15590 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E1956_15590 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 DUF5446
Other DBs
NCBI-ProteinID: QBR00633
UniProt: A0A4V1AZV9
LinkDB
Position
2:45938..48763
AA seq 941 aa
MPEELRVDTKLQQQTGLEGKTLLLVDGSSYLYRAFHAMPDLRGPDGEPTGALYGIINMLR
RMRKDVTAEYSACVFDAKGKTFRDDWYPEYKANRPSMPEPLAAQIAPIHEAVRSLGWPLL
MIEGVEADDVIGTLASQAEKLGMKVVVSTGDKDLAQLVTDHVTLINTMTNEMLDREGVIA
KFGVPPERIVDYLSLIGDTVDNVPGVNKCGPKTAVKWLTQYGTLDGIVEHVDEIKGAVGG
YLREALDFLPMAKKLVTVETACNLAPHLESIEASLATRPEALEDLRDIFARHGFKTWLRE
ANDAIQNGTVAAPTATATAATAEKAPEKDANVQPALFVDAPRHYDTIQTWDQFDAWLRKI
EAAELTAFDTETTALDPMVAKLVGMSFSTEPGSAAYLPLAHRGPDAPEQLPLDEVLARLK
PWLESEQHKKVGQHMKYDEQVLANYGIELNGVEFDTLLESYVLESHRTHDMDSLALRHLG
IKTIKYEEVAGKGAQQIGFDEVALEQAAEYAAEDADVTLQLHLALYPQIVPEKGLDYVYR
EIELPTSRVLRKMERNGVLIDTERLEKQSAEIAVRLVELEQQAYALAGGEFNLGSPKQIG
QIFFEKLQLPVVKKTPSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLAKLKSTYTDKLPRM
VNAQTGRVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPPGCKIVSADYS
QIELRIMAHISGDESLLEAFKRGDDIHRATAAEVFGVTPLEVSNDQRRIAKVINFGLIYG
MSAFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRMDAKSRGYVETVFGRRLWLPE
INGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQQWLDKRKIATKMIMQVHDELVLE
VPDDELAEVRKCLPELMCSVAKLKVPLVAEVGVGANWEEAH
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcctgaagaactacgcgtggatacaaagctacagcaacaaaccgggctggaaggtaag
accctgctgctggtcgacggttctagctacctctatcgtgccttccatgcaatgcctgat
ctgcgcggtccagacggcgaaccgacaggtgcgctatacggcatcatcaatatgctgcgc
cgcatgcgcaaggacgttacggcagagtatagcgcgtgcgtgttcgatgcaaagggcaag
acgtttcgtgacgactggtatcccgagtacaaggcgaaccggccatccatgcccgagccg
ctcgcggcgcaaatcgcgcctatccacgaggccgtgcgctcgctcggctggccgctcctg
atgatcgaaggcgtcgaggccgacgacgtgatcggcacgctcgcaagccaggcggaaaag
ctcggcatgaaggtggtcgtgtccacgggcgacaaggaccttgcgcagctcgtgaccgac
cacgtcacgctcatcaacacgatgaccaacgagatgctcgaccgcgaaggcgtgatcgcg
aagttcggcgtgccgccggagcgcatcgtcgactatctctcgctgatcggcgacacggtg
gacaacgtgccgggcgtgaacaagtgcggcccgaagacggcggtgaagtggctcacgcaa
tacggcacgctcgacggcatcgtcgagcatgtggatgaaatcaagggcgccgtcggtggc
tatctgcgcgaagcgctcgacttcctgccgatggcgaagaagctcgtcacggtagagacc
gcttgcaatctcgcgccgcacctcgaatcgatcgaggcgtcgctcgccacgcgtcccgaa
gcactcgaagacctgcgcgatatcttcgcgcgccacggcttcaagacctggctgcgtgag
gcgaacgacgccattcagaacgggaccgtggctgcgcccacggccacggcgacagcggcc
acagcggagaaggcgcccgagaaggacgcgaacgtgcagcccgcattgttcgtcgacgcg
ccgcgccactacgacacgatccagacatgggatcagttcgacgcgtggctcaggaagatc
gaagcggcagagctcaccgcgttcgacacggaaaccaccgcgctcgatccgatggtggcg
aagctcgtgggcatgtcgttctccaccgagcctggcagcgccgcgtatctgccgctagcg
catcgcgggcccgacgctcccgagcaactgccgctcgacgaagtgctcgcacgcctgaag
ccgtggctcgaaagcgagcagcacaagaaggtcggccagcacatgaagtacgacgagcag
gtgctcgcgaactatggcatcgagctgaacggcgtcgaattcgacacgctgctcgaatcg
tacgtgctcgaatcgcatcgcacgcacgacatggacagcctcgcgctgcgccatctcggc
atcaagacgatcaagtacgaggaggtcgcgggcaagggcgcgcagcagatcggcttcgac
gaagtggcgctcgagcaggccgccgaatacgcagccgaagacgccgatgtcacgctgcaa
ctgcacctcgcgctctatccgcagatcgtgcccgagaagggcctcgattacgtgtatcgc
gagatcgaattgcccacctcgcgcgtgctgcgcaagatggagcgcaatggcgtcctgatc
gacacggagcggcttgagaagcagagcgccgagatcgcggtgcggctcgtcgagctcgaa
cagcaggcctacgcgctcgcgggcggcgagttcaatctcggctcgcccaagcagatcggc
cagatctttttcgagaagctgcaactgccggtcgtgaagaagacgccgagcggtgcgccg
tccaccgacgaagaggtgctgcaaaagctcgccgaggactacccgctgcccaagctgctg
ctcgagcatcgcggtcttgccaagctcaagtccacctacaccgacaagctgccgcgcatg
gtcaacgcgcaaacgggtcgtgtccacacgaactacgcgcaggcggtggcggtcacgggc
cggctcgcctcgaacgacccgaatctgcagaacattccggtgcgcacgggtgaaggccgg
cgcattcgcgaggcgttcatcgcgccgccgggctgcaagatcgtgtccgccgattattcg
cagatcgaactgcgcatcatggcgcacatctcgggcgacgagtcattgctcgaggcgttc
aagcgcggcgacgacattcaccgcgcgacggcggcggaagtgttcggcgtgacgccgctc
gaagtgagcaacgaccagcggcgcatcgccaaggtcatcaacttcgggctgatctacggc
atgagcgcgtttggccttgcctcgaatctcggcatcacgcgtgatgcggccaagctctat
atcgaccgctatttcgcgcgttatccgggggtggcgcgctatatggacgagacccgcatg
gacgcgaaatcgcgcggctatgtcgagaccgtattcggccgccgcctgtggctacccgag
atcaacggcggcaacggtccgcgccgccaggccgccgagcgcgccgccatcaacgcgccg
atgcagggcacggccgccgatctcatcaagctttcgatgatcgccgtgcagcagtggctc
gacaagcgcaagatcgccacgaagatgatcatgcaggtccacgatgaactggtgctcgaa
gtgcccgacgacgaactcgccgaagtgcgcaagtgcttgccggaactgatgtgctcggtg
gcgaagctgaaggtgccgctcgtggccgaagtgggtgtgggtgcgaactgggaagaagcg
cactga

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