Paraburkholderia pallida: E1956_15590
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Entry
E1956_15590 CDS
T09864
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppai
Paraburkholderia pallida
Pathway
ppai03030
DNA replication
ppai03410
Base excision repair
ppai03420
Nucleotide excision repair
ppai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E1956_15590 (polA)
03410 Base excision repair
E1956_15590 (polA)
03420 Nucleotide excision repair
E1956_15590 (polA)
03440 Homologous recombination
E1956_15590 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppai03032
]
E1956_15590 (polA)
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_15590 (polA)
Enzymes [BR:
ppai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E1956_15590 (polA)
DNA replication proteins [BR:
ppai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E1956_15590 (polA)
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E1956_15590 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E1956_15590 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF5446
Motif
Other DBs
NCBI-ProteinID:
QBR00633
UniProt:
A0A4V1AZV9
LinkDB
All DBs
Position
2:45938..48763
Genome browser
AA seq
941 aa
AA seq
DB search
MPEELRVDTKLQQQTGLEGKTLLLVDGSSYLYRAFHAMPDLRGPDGEPTGALYGIINMLR
RMRKDVTAEYSACVFDAKGKTFRDDWYPEYKANRPSMPEPLAAQIAPIHEAVRSLGWPLL
MIEGVEADDVIGTLASQAEKLGMKVVVSTGDKDLAQLVTDHVTLINTMTNEMLDREGVIA
KFGVPPERIVDYLSLIGDTVDNVPGVNKCGPKTAVKWLTQYGTLDGIVEHVDEIKGAVGG
YLREALDFLPMAKKLVTVETACNLAPHLESIEASLATRPEALEDLRDIFARHGFKTWLRE
ANDAIQNGTVAAPTATATAATAEKAPEKDANVQPALFVDAPRHYDTIQTWDQFDAWLRKI
EAAELTAFDTETTALDPMVAKLVGMSFSTEPGSAAYLPLAHRGPDAPEQLPLDEVLARLK
PWLESEQHKKVGQHMKYDEQVLANYGIELNGVEFDTLLESYVLESHRTHDMDSLALRHLG
IKTIKYEEVAGKGAQQIGFDEVALEQAAEYAAEDADVTLQLHLALYPQIVPEKGLDYVYR
EIELPTSRVLRKMERNGVLIDTERLEKQSAEIAVRLVELEQQAYALAGGEFNLGSPKQIG
QIFFEKLQLPVVKKTPSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLAKLKSTYTDKLPRM
VNAQTGRVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPPGCKIVSADYS
QIELRIMAHISGDESLLEAFKRGDDIHRATAAEVFGVTPLEVSNDQRRIAKVINFGLIYG
MSAFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRMDAKSRGYVETVFGRRLWLPE
INGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQQWLDKRKIATKMIMQVHDELVLE
VPDDELAEVRKCLPELMCSVAKLKVPLVAEVGVGANWEEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaactacgcgtggatacaaagctacagcaacaaaccgggctggaaggtaag
accctgctgctggtcgacggttctagctacctctatcgtgccttccatgcaatgcctgat
ctgcgcggtccagacggcgaaccgacaggtgcgctatacggcatcatcaatatgctgcgc
cgcatgcgcaaggacgttacggcagagtatagcgcgtgcgtgttcgatgcaaagggcaag
acgtttcgtgacgactggtatcccgagtacaaggcgaaccggccatccatgcccgagccg
ctcgcggcgcaaatcgcgcctatccacgaggccgtgcgctcgctcggctggccgctcctg
atgatcgaaggcgtcgaggccgacgacgtgatcggcacgctcgcaagccaggcggaaaag
ctcggcatgaaggtggtcgtgtccacgggcgacaaggaccttgcgcagctcgtgaccgac
cacgtcacgctcatcaacacgatgaccaacgagatgctcgaccgcgaaggcgtgatcgcg
aagttcggcgtgccgccggagcgcatcgtcgactatctctcgctgatcggcgacacggtg
gacaacgtgccgggcgtgaacaagtgcggcccgaagacggcggtgaagtggctcacgcaa
tacggcacgctcgacggcatcgtcgagcatgtggatgaaatcaagggcgccgtcggtggc
tatctgcgcgaagcgctcgacttcctgccgatggcgaagaagctcgtcacggtagagacc
gcttgcaatctcgcgccgcacctcgaatcgatcgaggcgtcgctcgccacgcgtcccgaa
gcactcgaagacctgcgcgatatcttcgcgcgccacggcttcaagacctggctgcgtgag
gcgaacgacgccattcagaacgggaccgtggctgcgcccacggccacggcgacagcggcc
acagcggagaaggcgcccgagaaggacgcgaacgtgcagcccgcattgttcgtcgacgcg
ccgcgccactacgacacgatccagacatgggatcagttcgacgcgtggctcaggaagatc
gaagcggcagagctcaccgcgttcgacacggaaaccaccgcgctcgatccgatggtggcg
aagctcgtgggcatgtcgttctccaccgagcctggcagcgccgcgtatctgccgctagcg
catcgcgggcccgacgctcccgagcaactgccgctcgacgaagtgctcgcacgcctgaag
ccgtggctcgaaagcgagcagcacaagaaggtcggccagcacatgaagtacgacgagcag
gtgctcgcgaactatggcatcgagctgaacggcgtcgaattcgacacgctgctcgaatcg
tacgtgctcgaatcgcatcgcacgcacgacatggacagcctcgcgctgcgccatctcggc
atcaagacgatcaagtacgaggaggtcgcgggcaagggcgcgcagcagatcggcttcgac
gaagtggcgctcgagcaggccgccgaatacgcagccgaagacgccgatgtcacgctgcaa
ctgcacctcgcgctctatccgcagatcgtgcccgagaagggcctcgattacgtgtatcgc
gagatcgaattgcccacctcgcgcgtgctgcgcaagatggagcgcaatggcgtcctgatc
gacacggagcggcttgagaagcagagcgccgagatcgcggtgcggctcgtcgagctcgaa
cagcaggcctacgcgctcgcgggcggcgagttcaatctcggctcgcccaagcagatcggc
cagatctttttcgagaagctgcaactgccggtcgtgaagaagacgccgagcggtgcgccg
tccaccgacgaagaggtgctgcaaaagctcgccgaggactacccgctgcccaagctgctg
ctcgagcatcgcggtcttgccaagctcaagtccacctacaccgacaagctgccgcgcatg
gtcaacgcgcaaacgggtcgtgtccacacgaactacgcgcaggcggtggcggtcacgggc
cggctcgcctcgaacgacccgaatctgcagaacattccggtgcgcacgggtgaaggccgg
cgcattcgcgaggcgttcatcgcgccgccgggctgcaagatcgtgtccgccgattattcg
cagatcgaactgcgcatcatggcgcacatctcgggcgacgagtcattgctcgaggcgttc
aagcgcggcgacgacattcaccgcgcgacggcggcggaagtgttcggcgtgacgccgctc
gaagtgagcaacgaccagcggcgcatcgccaaggtcatcaacttcgggctgatctacggc
atgagcgcgtttggccttgcctcgaatctcggcatcacgcgtgatgcggccaagctctat
atcgaccgctatttcgcgcgttatccgggggtggcgcgctatatggacgagacccgcatg
gacgcgaaatcgcgcggctatgtcgagaccgtattcggccgccgcctgtggctacccgag
atcaacggcggcaacggtccgcgccgccaggccgccgagcgcgccgccatcaacgcgccg
atgcagggcacggccgccgatctcatcaagctttcgatgatcgccgtgcagcagtggctc
gacaagcgcaagatcgccacgaagatgatcatgcaggtccacgatgaactggtgctcgaa
gtgcccgacgacgaactcgccgaagtgcgcaagtgcttgccggaactgatgtgctcggtg
gcgaagctgaaggtgccgctcgtggccgaagtgggtgtgggtgcgaactgggaagaagcg
cactga
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