Paraburkholderia pallida: E1956_17445
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Entry
E1956_17445 CDS
T09864
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppai
Paraburkholderia pallida
Pathway
ppai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E1956_17445 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_17445 (recD)
Enzymes [BR:
ppai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E1956_17445 (recD)
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E1956_17445 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
SH3_13
AAA_22
Helicase_RecD
SLFN-g3_helicase
AAA_16
UvrD-helicase
OGG
T2SSE
NTPase_1
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QBR00674
UniProt:
A0A4P7D2H8
LinkDB
All DBs
Position
2:497674..499821
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AA seq
715 aa
AA seq
DB search
MQADLVVRATVCESSAQMLATLGRWVERGWLRTLDGAFARFLLDEAPDAPPLLLLAAALA
SHQLGRGHVCLDLHATLDDPAFALSLPPDGPQLLTDEPPLPPAEVLAGVTLTQWLNALDM
PDLVGREQGNTPLVLAGTRLYLRRYWQYEQDVRAGIEARLAHAARLEAELPPALARAALD
ALFAPRRADAKGADWQKLACALAARSAFSIITGGPGTGKTTTVVKLLALLQTLALGRAAN
PQSPGGRPLRIRLAAPTGKAAARLNESIAGAVARLPFEALAQQVDAAALSSAIPTVVTTL
HRVLGTRPGSRRFRHDAGNPLPVDVLVIDEASMVDLEMMAAVLDALPPTARLVLLGDKDQ
LASVEAGAVLGELCNRAREGHYTQASRSWLEAATGERIDAAMLDARGTPLDQAVAMLRES
HRFASESGIGALADLVNVGDATGVAKIWRHGYADLARLVCPAHDDAPLRALIVDGAVSEA
PEAHEARDVPGRDAQRRGYRHYLTTMRALRPAPGASPEALSEWAAAVLKAHTEFQLLCAL
RRGAWGVEGLNRRVARILQDEGLIEPLGDWYAGRPVLVTHNDYELGLMNGDIGIALDLPV
EAGAPPVLRVAFPAGDGAGGVKWVSPSRLQGVETVFALTVHKSQGSEFTHAALVLPDTYS
PILTRELVYTGITRARAFLTLALPEGRSVLDRAVQAKVQRASGLMAGLAHDAEAQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgatttggttgttcgcgcaacggtatgcgaatcgtctgcgcagatgcttgcc
acgcttggccgttgggtcgagcgcggctggctgcgtacgctcgacggcgccttcgcccgt
tttctgctggacgaggcgcccgatgcaccgccgctgttgttgctggccgcagcgctcgcg
agccaccagttggggcgggggcacgtttgcctcgacttgcacgcgacgctcgacgatccg
gccttcgcgctttcgttgccgccggatggcccgcaattgctcactgacgagccgccgctg
ccgcccgccgaggtgctggctggcgtgacgctcacgcagtggctgaacgcgctcgacatg
cccgacctggtcggccgcgagcaaggcaatacgccgctcgtgctcgcgggcacgcggctc
tatctgcggcgctactggcagtacgagcaggatgtgcgcgcaggtatcgaagcgcgcctc
gcgcacgcagcccggctcgaggccgagttgccccccgcgctcgcccgtgcggcgctcgac
gcgctgtttgcgccgcgccgcgcagatgcgaaaggcgcggactggcagaagctcgcttgt
gcgctcgcggcgcgcagcgccttcagcatcatcacgggcggtcccggcaccggcaagacg
accacggtcgtgaagctgctcgcgctgttgcagacgctggcgctgggccgcgcggcgaat
ccgcagagccccggcgggcggccgctgcggattcgcctcgcagcgcccacgggcaaggcg
gcggcgcgcctgaacgaatcgatcgctggcgccgttgcacggctgccgttcgaggcgctc
gcgcagcaggtggacgccgccgcgctaagcagcgcgattcccaccgtggtgacgaccttg
caccgcgtgctgggcacgcggccgggcagccggcgctttcgccacgacgcgggcaatccg
ctgcccgtcgacgtgctcgtgatcgacgaggcctccatggtcgatctcgagatgatggcg
gccgtgctcgatgccttgccgcccacggcgcgtctcgtcctgctcggcgacaaggatcaa
ttggcctcggtggaagcgggcgcggtgctgggcgagctctgcaaccgcgcgcgcgaaggc
cactacacgcaggcgtcgcggagctggctcgaggccgcgacgggcgagcggatcgatgcc
gcgatgctcgatgcgcgcggcacgccgctcgatcaggccgtggccatgctgcgcgagagt
catcgtttcgcatcggaaagcgggatcggcgcgctggccgatctcgtcaacgtgggcgac
gccacaggcgtggcaaaaatctggcggcatggctacgcggatctcgcacggctcgtttgt
cctgcgcacgacgacgcgccgctgcgcgcgctcatcgtagacggtgctgtgagcgaggcg
ccggaagcgcacgaagcgcgcgatgtccccgggcgggacgcgcagcggcgcggctaccgg
cactacctgacgacgatgcgtgccttgcgtcccgcgccgggcgcgtcgcccgaggcactc
tccgagtgggcggccgcggtgctgaaggcgcataccgagttccagctgctgtgcgcgctg
cggcgcggcgcatggggcgtggaagggctcaaccggcgcgttgcgcggatcttgcaggac
gaggggttgatcgagccgctcggcgactggtacgcgggccggccggtgctcgtcacgcat
aacgactacgaactcggcctgatgaacggcgatatcggcattgcgctcgatctgccggtg
gaggcgggcgcgcccccggtgctgcgcgtggcgttcccggccggtgacggcgcgggcggg
gtgaaatgggtatcgccgagccgcctgcagggtgtcgagaccgtgtttgcgctcaccgtc
cacaagtcccagggctcggagttcacgcacgcggcgctcgtgctgcccgatacctacagc
ccgatcctcacgcgcgaactcgtctacaccgggatcacgcgggcgcgcgcgtttctcacg
ctggcgctgcccgaggggcgctcggtgctcgaccgcgcggttcaggcgaaggtccagcgc
gcgagtggcttgatggcggggcttgcgcacgacgccgaggcgcagtga
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