KEGG   Paraburkholderia pallida: E1956_19485
Entry
E1956_19485       CDS       T09864                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
ppai  Paraburkholderia pallida
Pathway
ppai03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppai00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E1956_19485 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppai02044]
    E1956_19485 (tssH)
Secretion system [BR:ppai02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E1956_19485 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N ClpB_D2-small AAA_22 AAA_25 AAA_16 nSTAND3 NBD_SMAX1 AAA_7 TniB Sigma54_activat NACHT ResIII ARM_KDM8_N Zeta_toxin ABC_tran_CTD SLFN-g3_helicase T2SSE HB_ELP1 SRP54 NTPase_1 DUF815 TMF_TATA_bd
Other DBs
NCBI-ProteinID: QBQ99377
UniProt: A0A4P7CVL8
LinkDB
Position
2:complement(945230..947932)
AA seq 900 aa
MSTPLKTLITKLNTTSRLAAERAASSCLSRGHYEVDLEHLFLALLEEPASDLVCALRASR
VDPHAVRADLERELQHFKTGNTRTPVFSPHLIALFEQAWLIASLDTQIGRIRSGHLLLAL
LGAPDLAQFAQRMSARLAEVPVAELKHRFDKLTEGSVEGVPRDAERNAAQHAGASGEGAA
EPGASAGPSKTPALDTYTTDLTQRAREGHVDPVIGREGEIRQTIDILMRRRQNNPILTGE
PGVGKTAVVEGLALRIAEGDVPEPLRNVALRVLDMGLLQAGASVKGEFENRLKSVIDEVK
KSPQPIVLFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDA
ALARRFQVVKIEEPGEALAAAMLRGMTGLMERHFNVRILDEAITEAVRLSHRYISARQLP
DKAVSVLDTACAKVALAHSSTPGAIDDGKRRIERIEAEIAALEREAANGAAHDERLAELR
AQRDEAAAAVAEDEVRYASERELVAQIAALRGRIDATRETREAGATDNAAKLARDAEVAR
AALPALIEQLHALQGDGPMVPLHVDAHVVAEVVASWTGIPLGRMVKDEIKTVLNLNPLLG
ERVIGQDHALEAIAQRVRTANANLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGER
KLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVL
EMFFQIFDKGTMDDAEGRAIDFRNTLIILTSNVGSAAVMQACLNKAAEELPDADALAELL
RPQLYKTFKPAFLGRMKVIPYYPISDDVLVEIIELKLERIRRRIESNHSAAFEWDDSLVE
AVLARCTEVDSGARNVDHILNGTLLPELAQQVLERIAQGTALASVAVRANDAGEFEYTVN
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgagcacgcctctcaagaccctgattacgaagctcaatacgaccagccgcctcgcggcc
gaacgggcggccagctcgtgcctgtcgcgcggacattacgaagtcgatctcgagcacctg
tttctcgcgctgctcgaagagccggcgtccgatctcgtgtgcgcgctgcgcgcctcgcgc
gtcgatccgcatgcggtgcgcgccgatctcgagcgcgaattgcagcacttcaagacgggc
aacacgcgcacgccggtgttctcgccgcatctcatcgcgctgttcgagcaggcgtggctg
atcgcttcgctcgacacgcagatcggccgcatccgctcgggccatctgctgctcgcgctg
ctgggcgcgcccgatctcgcgcagtttgcgcaacgcatgtcggcgcgtctcgccgaggtg
ccggtggccgagctcaagcaccgcttcgacaaactgaccgaaggctccgtggaaggcgtg
ccgcgcgacgccgaacgcaacgcggcgcaacacgctggtgcctccggtgaaggcgcggcg
gagccgggcgcaagcgccggcccctcgaagacgcccgcgctcgacacctatacgaccgat
ctcacgcagcgcgcgcgagaaggccacgtggacccggtgatcggccgtgaaggcgagatc
cgccagaccatcgacatcctgatgcggcgccgccagaacaacccgatcctcacgggcgag
ccgggcgtcggcaagacggcggtggtggagggcctcgcgctgcgcatcgccgagggcgac
gtgcccgagccattgcgcaacgtcgcgctgcgcgtgctcgacatgggcctgctgcaggcg
ggcgcgagcgtgaagggcgagttcgagaaccgcctgaaaagcgtgatcgacgaggtgaag
aagagcccgcagcccatcgtgctgttcatcgacgaggcgcatacgatcatcggcgcgggc
ggccaggcgggccagaacgacgccgccaacctgctcaagccggcgctcgcgcgcggcgag
ctgcgcacaatcgcggccacgacctggagtgagtacaagaagtacttcgagaaggatgcc
gcgctcgcgcggcgcttccaggtggtgaagatcgaggagcccggtgaagcgcttgcggcg
gccatgctgcgcggcatgacggggctcatggagcgccacttcaatgtgcgcattctcgac
gaggcgatcaccgaagccgtgcgcctctcgcatcgctatatcagcgcgcgccagctgccc
gacaaggcggtgagcgtgctcgacaccgcgtgcgcgaaggtcgcgctcgcgcatagctcg
acgcctggcgcgatcgacgacggcaagcgccgcatcgagcgcatcgaggccgagatcgcg
gcgctcgaacgcgaagcggccaacggcgccgcgcacgacgaacgccttgccgaattgcgc
gcgcaacgcgacgaagccgcggccgccgttgccgaagacgaagtacgctacgccagcgag
cgcgagcttgtcgcgcagatcgcggcgctgcgcggccgtatcgacgcgacgcgcgaaacg
cgcgaagcgggcgcgacggacaatgcggccaaacttgcccgcgacgccgaagtcgcgcgc
gcggcgctgcccgcgctcatcgagcaactgcatgcgctgcagggcgacggcccgatggtg
ccgctgcacgtggacgcgcacgtggtggccgaagtagtcgcgtcgtggaccggcattccg
ctgggccgcatggtgaaggacgagatcaagacggtgctcaacctgaacccgctgctcggc
gagcgcgtgatcggccaggaccatgcgctcgaggccatcgcacagcgcgtgcgcacggcg
aacgcgaatctcgaggacccgaacaaaccgcgcggcgtattcatgttcgtaggcccctcg
ggcgtgggcaagaccgaaacggcgctcgcgctcgccgatatcctttatggcggcgaacgc
aagctcgtgaccatcaacatgagcgagtatcaggaggcgcatagcgtctcgggcctgaag
ggctcgccgccgggctacgtgggctacggcgaaggcggcgtgctgaccgaggcggtgcgc
cgcaacccgtattcggtcgtgctgctcgacgaagtcgaaaaggcccaccccgacgtgctg
gaaatgttcttccagatcttcgacaagggcacgatggacgacgccgaagggcgcgcgatc
gatttccgcaacacgttgatcatcctgacctcgaacgtgggctcggcggcggtgatgcag
gcatgcctgaacaaggccgccgaagaactgccggacgccgacgcacttgccgagctgttg
cgcccgcaactttacaagactttcaagcctgccttcctcgggcgcatgaaggtcattccg
tactatccgatctccgacgacgtgctcgtggagatcatcgaactcaagctcgaacgcatc
cgccggcgcatcgagtcgaaccacagcgctgccttcgagtgggacgactcgctcgtggaa
gccgtgctggcccgttgcaccgaagtggactcgggcgcgcgcaacgtcgaccatattctg
aacggcacgctgctgccggagcttgcgcagcaggtgctcgaacgcatcgcgcagggcacc
gcgctcgcgagcgtggcggtgcgcgcgaatgatgccggcgagttcgaatacaccgtgaat
tga

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