Paraburkholderia pallida: E1956_25860
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Entry
E1956_25860 CDS
T09864
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
ppai
Paraburkholderia pallida
Module
ppai_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppai02000
]
E1956_25860
01504 Antimicrobial resistance genes [BR:
ppai01504
]
E1956_25860
Transporters [BR:
ppai02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E1956_25860
Antimicrobial resistance genes [BR:
ppai01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
E1956_25860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
Phage_sheath_1
PASTA
CusB_dom_1
SIS
Motif
Other DBs
NCBI-ProteinID:
QBR00466
UniProt:
A0A4P7CW99
LinkDB
All DBs
Position
2:2406623..2407840
Genome browser
AA seq
405 aa
AA seq
DB search
MSLNSYSRKRIALAVAAFLVVSGFGSLVAMRLDSHPAVAAEAPPAPEVDVAAVVKRNVTD
WQTYSGRMAAVEKVEVRPQVSGTIVSVNFRDGALVKKGDTLFVIDPRPYQAAVDQAAAQV
AAAQARTGYAQSDWERAQRLIGDNAIAKRDYDEKQNGAREASANLKAAQAALEAAQINLG
YTRIVAPVSGRVSRAEITVGNVVSAGASAPPLTTLVSVSPIYAEFDADEQTYLDYISRMK
DGSKVPVDLGLANETGYSRTGTIESVDNRLDTASGTIRVRARFDNEDGALVPGLYARIKV
SGSAPHPALLVDEAAIGTDQDKKFVYVVDGAGKVAYRTVQIGGQQGNLRVIVNGLQAGEH
VVVNGTQRVRPGEAVRSNMVPMNGDPDGDAASSLANSAPKTAKTS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcaactcgtattctcgtaagcgcattgcactcgctgtcgccgcttttctcgtc
gtttcggggttcggctcgctcgtcgccatgcgtctggattcgcacccggctgtcgccgct
gaagcaccgccggcgccggaagtcgatgtcgccgccgtggtcaagcgcaacgtcaccgac
tggcagacctactcgggccgcatggcggccgtcgagaaggtcgaagtgcgcccgcaggtc
tcgggcacgatcgtgtccgtgaatttccgtgacggcgcgctcgtgaaaaagggcgacacg
ctgttcgtgatcgacccgcgcccgtatcaggccgccgttgaccaggccgcggcccaggtg
gccgccgcccaggcccgcaccggctacgcgcagagcgactgggagcgcgcgcagcgcctc
atcggcgacaacgccatcgcgaagcgcgactacgacgagaagcagaacggcgcgcgcgaa
gcgagcgcgaatctgaaggccgcgcaggccgcgctcgaggccgcgcagatcaatctcggc
tatacgcgcatcgtcgcgccggtctcggggcgcgtctcgcgcgcggagatcacggtgggc
aacgtggtctcggcgggcgcgagcgcgccgccgctcacgacgctggtttcggtgtcgccg
atctacgccgagttcgacgccgacgagcagacctatctcgactacatcagccgcatgaag
gatggctcgaaagtccccgtcgatctggggctcgcgaacgagaccggctattcgcgcacg
ggcacgatcgagtcggtggacaaccggctcgataccgcctcgggcacgatccgtgtgcgc
gcgcgcttcgacaacgaggatggcgcgctggtgcccggtctctacgcgcgcatcaaggtg
agcggcagcgcgcctcacccggcactgctcgtcgacgaagcggccatcggcacggaccag
gacaagaagttcgtctatgtcgtggatggcgcgggcaaggtcgcctatcgcaccgtgcag
atcggcgggcagcagggcaatctgcgcgtgatcgtgaacggcctccaggcgggtgagcac
gtggtcgtgaatggcacgcagcgcgtgcggccgggcgaagccgtgcgctcgaacatggtg
ccgatgaacggcgacccggacggcgacgccgcctcctcgctcgcgaactccgcgcccaag
accgccaagacttcctga
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