Paraburkholderia pallida: E1956_27220
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Entry
E1956_27220 CDS
T09864
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppai
Paraburkholderia pallida
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppai03032
]
E1956_27220
03036 Chromosome and associated proteins [BR:
ppai03036
]
E1956_27220
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_27220
DNA replication proteins [BR:
ppai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E1956_27220
Chromosome and associated proteins [BR:
ppai03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E1956_27220
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E1956_27220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QBR00942
UniProt:
A0A4P7D322
LinkDB
All DBs
Position
3:112940..113221
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AA seq
93 aa
AA seq
DB search
MNRRELIDAVAFATGLNRAVAGEAIDGLVGAITKAVARGDTVQLIGFGSFSRGKRGARVG
RHPVTGEQTNIAATRTVKFTAGKNFKDALNAHR
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaggcgtgaattgatcgatgccgttgcattcgctacgggtctaaacagggctgtc
gccggcgaagcgatcgatgggctggttggcgccatcacgaaggcggttgccagaggcgat
acggtgcagctaatcggtttcggttcgtttagccggggcaagcgcggtgctcgcgttgga
agacatcccgtgacgggcgagcagaccaatatcgcggcgacgagaacggtgaagttcacc
gcaggcaagaacttcaaggacgcgctgaacgcgcaccggtag
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