Paraburkholderia pallida: E1956_31545
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Entry
E1956_31545 CDS
T09864
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppai
Paraburkholderia pallida
Pathway
ppai00260
Glycine, serine and threonine metabolism
ppai00460
Cyanoamino acid metabolism
ppai00630
Glyoxylate and dicarboxylate metabolism
ppai00670
One carbon pool by folate
ppai00680
Methane metabolism
ppai01100
Metabolic pathways
ppai01110
Biosynthesis of secondary metabolites
ppai01120
Microbial metabolism in diverse environments
ppai01200
Carbon metabolism
ppai01230
Biosynthesis of amino acids
ppai01240
Biosynthesis of cofactors
ppai04981
Folate transport and metabolism
Module
ppai_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E1956_31545
09102 Energy metabolism
00680 Methane metabolism
E1956_31545
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E1956_31545
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
E1956_31545
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
E1956_31545
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
E1956_31545
Enzymes [BR:
ppai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
E1956_31545
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
QBR01697
UniProt:
A0A4P7D369
LinkDB
All DBs
Position
3:complement(1117881..1119155)
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AA seq
424 aa
AA seq
DB search
MSNTQAFFSQPLAERDSAVRKSILKEIERQQSQVEMIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEFMDDIESLAIERIKQLFNAGFANVQPHSGAQANGAVMLALAKPGDTV
LGMSLDAGGHLTHGAKPALSGKWFNAVQYGVNRETMRIDYDQVEELAQQHKPSLIIAGFS
AYPRQLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR
GGFILTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALDPSFKTYIDNVLANAQA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDTEKPT
VTSGIRLGTPAGTTRGFGVAEFREIGRLILEVFDSLREHPEGDAATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatactcaagctttcttttcgcagccgctagccgagcgcgactccgcggtgcgt
aaaagcattttgaaagaaatcgagcggcagcagtcgcaggtcgaaatgatcgcgtcggaa
aacatcgtgtcgcgcgccgtgctggaggcgcagggctcggtgctcaccaacaagtacgcg
gaaggctatccgggcaagcgctattacggcggttgcgaattcatggacgatatcgagtcg
ctggcgatcgagcgcatcaagcaactcttcaacgccggcttcgccaacgtccagccgcat
tcgggcgcccaggccaacggcgcggtcatgctcgcactggccaagcccggcgacaccgtc
ctcggcatgtcgctcgacgcgggcggccacctcacgcacggcgcgaagcccgcgctttcg
ggcaagtggttcaacgcggtgcagtacggcgtgaaccgcgaaaccatgcgcattgactac
gaccaggtcgaagagctcgcgcagcagcacaagcccagcctcatcatcgccggtttctcc
gcttatccgcgtcagctcgatttcgcgcgcttccgcgcgatcgccgatagcgtgggcgcg
aagctgatggtcgacatggcgcatatcgcgggcgtgatcgccgccggccgtcatgcgaac
ccggtcgagcacgcgcacgtcgttacgtccaccacgcacaagacgctgcgcggtccgcgc
ggcggcttcatcctcaccaacgacgaagacatcgccaagaagatcaactcggccgtgttc
ccgggcctgcagggcggcccgctgatgcacgtgatcgccggcaaggcggtggcgttcggc
gaagcgctcgacccgagcttcaagacctatatcgacaacgtgctcgccaatgcccaggcg
ctgggcgaggtgctgaaggcgggcggcgtcgatctggtcaccggcggcaccgacaaccat
ctgctgctcgtggacctgcggcccaagggcctcaagggcgcgcaagtggagcaggcgctc
gagcgcgccggcatcacatgcaacaagaacggcatcccgttcgacacggaaaagcccacg
gtcacctcgggcattcgcctgggcacgccggcgggcacgacgcgcggcttcggcgtggcg
gagttccgcgagatcggccgcctgatcctcgaagtgttcgattcgctgcgcgagcatccg
gaaggcgacgccgccaccgagcagcgcgtgcgccgcgagatcttcgcgctctgcgaacgc
ttcccgatctattga
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