Paraburkholderia pallida: E1956_37275
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Entry
E1956_37275 CDS
T09864
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ppai
Paraburkholderia pallida
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppai03009
]
E1956_37275 (dbpA)
Enzymes [BR:
ppai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E1956_37275 (dbpA)
Ribosome biogenesis [BR:
ppai03009
]
Prokaryotic type
rRNA helicases
E1956_37275 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QBR02857
UniProt:
A0A4P7D602
LinkDB
All DBs
Position
4:complement(528402..529799)
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AA seq
465 aa
AA seq
DB search
MTNTPTATPFSALALAPATLENLARLGYAEMTPIQAASLPIALAGHDLIAQAKTGSGKTA
AFSLALLAKLDARRLDVQAMILCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMKPQ
TASLEHGAHIIVGTPGRIMDHLERGSLSLDALNTLVLDEADRMLDMGFFDDIAKVARQCP
KERQTLLFSATYPEGIAKLSQQFLRNPKEVKLEEHHDDSKIRQRFYEVTDEERLHAVGML
LNHYRPVSTIAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSVL
VATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMDEMGRVGG
IEQALKREVEWQPLAQLTPASDAPLLPPMETVQILGGRKEKIRPGDVLGALTGEAGFSGA
QIGKINVTDFSTYVAVERSIARKAVNRLNAGKVKGKKVRARLMEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacacccaccgccacgcccttcagcgcacttgcgctcgcgcccgccacgctc
gagaacctcgcccgcctcggctatgccgagatgacgcccatccaggccgccagcctgccg
atcgcgctcgcggggcacgacctcatcgcccaggcgaagacgggcagcggcaagaccgcc
gccttctcgctcgcgctgctcgcgaagctcgatgcgcgccgcctcgacgtgcaggcgatg
atcctctgccccacgcgcgagctggccgatcaggtcgcgcaggagatccgccgtctcgcg
cgcgccgaagagaacgtcaaggtgctcacgctgtgcggcggcacgccgatgaagccgcag
accgccagtctcgagcacggcgcgcatatcatcgtcggcacgccgggccgcatcatggat
cacctcgagcgcggcagcctctcgctcgacgcgctcaatacgctcgtgctcgacgaagcc
gaccgcatgctcgacatgggcttcttcgacgacatcgccaaggtggcgcggcaatgcccg
aaggagcgccagacgctgctgttctcggccacctaccccgaaggtatcgcgaagctgagc
cagcaattccttcgcaatcccaaggaagtgaagctcgaagagcatcacgacgacagcaag
atccgccagcgcttctacgaggtgacggacgaggagcgcctgcacgcggtgggcatgctg
ctcaatcactaccgccccgtgagcacgatcgcgttctgcaacaccaagcagcaatgccgc
gacttgctcgacgtgctgcgcgcccagggctttcatgcgctcgcgctgcacggcgagctc
gaccagcgcgagcgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctc
gtggcaaccgacgtggccgcgcgcggtctcgacatcgcccagctcgaagccgtgatcaat
gtcgacgtcacgcccgaccccgaggtctacgtgcaccgcatcggccgcacgggacgcgcg
gatcaggacggctgggcgctgagcctcgcgagcatggacgagatgggccgcgtgggcggc
atcgagcaggcgctcaagcgcgaagtcgaatggcagccgctcgcgcagctcacgcccgcc
agcgacgcgccgctgctgccgcccatggaaaccgtgcagattctcggcggacgcaaggaa
aagatccgtcccggcgatgtgctgggtgcgctcaccggcgaggccggcttcagcggcgcg
cagatcggaaagatcaacgtcacggatttttcgacttatgtggccgtggagcgcagcatc
gcgcgcaaggcggtgaaccggctcaacgccggcaaggtgaagggcaagaaggtgcgcgcg
cgcctgatggaggagtaa
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