Paraburkholderia pallida: E1956_39245
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Entry
E1956_39245 CDS
T09864
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ppai
Paraburkholderia pallida
Pathway
ppai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E1956_39245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_39245
Enzymes [BR:
ppai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
E1956_39245
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E1956_39245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBR03197
UniProt:
A0A4P7D6T7
LinkDB
All DBs
Position
4:1000896..1001441
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AA seq
181 aa
AA seq
DB search
MTRSSVTDAGSLQSLPDLLEPSLSLIFCGINPGLRAALTGHHFAGRGNRFWRVVHLAGFT
PEQIRPEDDHTLLRYGCGLTTVVPRATAQAAELTQSEIELAGDAFRQKIEQYAPRHIAFL
GKMALAAISGTRDIDWGLQTEPFCGARAWVVPNPSGLNRAFDLDALVTAYREVRVAVASA
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactcgctcatccgtgactgacgccggctcgcttcaatcgcttcccgatctgcttgaa
ccaagcttgtcgttgatattttgcggaattaatcctggtctccgtgcggcattgacaggt
caccacttcgcgggccggggcaaccgattctggcgcgtcgtgcatctcgccggctttacc
cccgaacaaattcggcccgaagacgatcacacgctgcttcgatatggctgcggtctcacg
acggtagtcccgcgagcgacagcacaggccgccgagctcacgcaatcggagattgaactg
gccggggatgcttttcggcaaaagatcgagcagtacgcgccgcggcacatcgccttcctc
ggaaagatggcgcttgcggcgatctccggcacgcgcgatatcgattgggggctgcaaacc
gagccattttgtggtgcacgcgcgtgggtcgtccccaatcccagcggactgaacagggcg
ttcgaccttgatgcgctggtgactgcctatcgggaagttcgcgttgcggtagcgtccgca
gcctga
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