Paraburkholderia pallida: E1956_41285
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Entry
E1956_41285 CDS
T09864
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppai
Paraburkholderia pallida
Brite
KEGG Orthology (KO) [BR:
ppai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppai03400
]
E1956_41285 (sbcD)
DNA repair and recombination proteins [BR:
ppai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E1956_41285 (sbcD)
Archaeal homologous recombinant proteins
E1956_41285 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QBR03556
UniProt:
A0A4P7D482
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All DBs
Position
4:1462532..1463815
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AA seq
427 aa
AA seq
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MRLLHTSDWHLGQNFMGKSRQAEHQQLIDWLVAQLDAHAVDAVLIAGDIFDTGTPPSYAR
ELYSQLVVRLHAAGVALLLLGGNHDSVATLRESSALLEQLSARVVPAADAPEHQVRVLPL
RPRRSNGNANVEAKESGGAGAAPGCVVCAVPFIRARDVMQSEYGQSAEQKQQSLQLAIQA
YYQAVHAAAEDQRRTLSAQLGRNVPLIATGHLTTVGASASESVREIYVGALDAFPTSAFP
SVDYLALGHIHRPQKVGGLEHIRYSGSPIALSFDEATQQKEVLLVDLGEAGLEAVTPLPV
PVFQPLVALKGNLKSLPDAFAQAASDASAERPVWLEVTVAEDDYLTDLPARIQTMTEGLP
LEVLRIRRERGTDVAQLSGDAGVTLDDLDPLDVFARRLAHETLEDDVRDALTERYKRVLA
ATVEGEA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcctccacacctcagactggcatctgggccagaacttcatgggcaagagccgc
caggccgagcatcagcagctcatcgactggctcgtggcccagctcgacgcgcatgccgtc
gatgccgtcctgatcgccggtgacatcttcgacaccggcacgccgcccagctacgcgcgc
gagctctatagccagctcgtcgtgcgcctgcacgcggccggcgtggcgctgctgctgctc
ggcggcaatcacgactcggtggcgacgctgcgcgaaagcagcgcgttgctggagcaactc
tccgcacgtgtggtgccggccgccgatgcgcctgagcatcaggtgcgcgtattgccgtta
cgaccacggcgctcgaacggcaacgcgaatgtcgaggcaaaggaaagcggcggtgcgggc
gcggcgcccggctgcgtggtctgcgcggtgcccttcattcgcgcgcgcgacgtcatgcaa
agcgaatacggccagagcgccgagcaaaagcagcaatcgctgcagctcgcgatccaggcc
tactatcaggccgtccacgcggcagcggaggaccagcgcagaacgttgagcgcgcaacta
ggccgcaacgtgccgctcatcgccacgggccatctcaccacggtgggcgcgagcgcgagc
gaatcggtgcgcgagatctacgtgggcgcgctcgatgccttccccaccagcgcgttcccg
agcgtggactatctcgcgctcgggcatatccaccggccccagaaggtgggcggcctcgag
catatccgctatagcggctcgcccatcgcgctgagcttcgacgaagccacccagcaaaaa
gaagttttgctcgtcgatctgggcgaagcgggcctcgaggccgtgacgcccctgccggtg
cccgtgtttcagccgctcgtcgcgctcaagggcaacctgaaatcgctgcccgacgccttc
gcgcaagccgcgagcgatgcctcggcggagcggcccgtctggctcgaagtgacggtggcc
gaagacgactacctgaccgacctccccgcacgaatccagacgatgaccgagggcctgccg
ctcgaagtgctgcgcattcgtcgcgagcgcggcaccgacgtggcgcagctatcgggcgat
gcaggcgtcacgctcgacgatctcgatccgctcgacgtgttcgcgcgccgtctcgcccac
gaaactctcgaagacgacgtgcgcgatgccctcaccgagcgctacaagcgtgtgctcgcc
gccaccgtggagggcgaagcatga
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