Pyxidicoccus parkwayensis: JY651_02015
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Entry
JY651_02015 CDS
T09992
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak03030
DNA replication
ppak03430
Mismatch repair
ppak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JY651_02015 (dnaE)
03430 Mismatch repair
JY651_02015 (dnaE)
03440 Homologous recombination
JY651_02015 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppak03032
]
JY651_02015 (dnaE)
03400 DNA repair and recombination proteins [BR:
ppak03400
]
JY651_02015 (dnaE)
Enzymes [BR:
ppak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JY651_02015 (dnaE)
DNA replication proteins [BR:
ppak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JY651_02015 (dnaE)
DNA repair and recombination proteins [BR:
ppak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JY651_02015 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QSQ23783
UniProt:
A0ABX7P2I1
LinkDB
All DBs
Position
525228..528782
Genome browser
AA seq
1184 aa
AA seq
DB search
MSFTHLHLHTLYSLLDGAIRMKDLIKTVKEKGMTSVAVTDHGNMFGAIDFYKKAKDAGIK
PILGMEAYVAGPKGREDRSEKVSHHLILVAKNAEGYANLRYLSSTAYMQGFYYHPRIDKK
VLAEHSKGLFALTACLGGEVTSACFRGDMDHARRAAQEYKDIFEPGHFFLEVQSNGMPEQ
DKANENLKQLSRDMDIPLCATADAHYIKREDARAHELLMCIASGKTLADGKRLKHSTDKL
YVTSPTEMLEAFKDIPEAVHNTQRIAEQCNLELKLGKPMLPTFKVPDSHTPDSFMAELAY
EGLRERFTELAHTVTYPIDREVYLDRLKLEIGVIQKMGFSGYFLIVQDFINWAKKQGIPV
GPGRGSGAGSLVAYALRITDVDPIPYNLLFERFLNPERVSMPDFDIDFCQDRRDEVIKYV
GRKYGEMNVGQIITFGSLKAKSVLRDVCRVFALPFSEGDRIAKLVPEVLNITLKEAIEME
PRLKEMMETPSNLGEVEGRPVTTKDVLEIALALEGLHRQPGMHAAGVVIADKPLWEFVPV
YQPPGEKTLITQFAKDEVEAAGLVKFDFLGLKTLTVIQHALDLVKRNHGKDIPRHEIPLN
DDKVWELMAKGDTAGVFQMESSGFTEMVVKLRPSCFEDVIAAGALYRPGPLDSGMVDVFI
NRKHGREKVSYPHPALEPVLKDTYGVIVYQEQVMQISQVLGGYTLGRADLLRRAMGKKKA
EVMQAERAGFLEGCAKNNVDLKVAGEIFDLMEKFAEYGFNKSHSAAYGLVTIHTAWLKAH
YPCEFMAALLSSEKDNTDKVVKHISEARESGLAVLPPDVNQSDLHFGAVEGKIRFGLGAI
KGVGEGAIESILEARKDGPFKSLFDFCERVDSRKVNRKVLEALVKAGSFDFEKRPRRQLF
DTIEKAMNRGSSSQKDKAAGQSSLFGMLAGPSSGSGGGLKDDYVAVEEWTEKERLALEKE
AIGFYVSGHPLHQYDKELKRYAKPITAVQRARKDDKLTVAGIVTILRERPTKTGKRMAWV
TIEDLSGSIELVCFPGKEGTRNVMGKDGKWSKQGPKPGFENWEHLLKSDDPILVTGTVQI
SQRDEESPTPELIVDDIQSLKAVREKRTKRLELRVPADLLTEERVAKLQELAKKYAGATP
VAVSVLFQGEGEALIGNTSIKVQVNDDLLTAVDRLFGMRVVEFG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttacccacctccacctgcacaccctctactcgctcctcgacggggcgattcgg
atgaaggacctcatcaagacggtgaaggagaaggggatgaccagcgttgccgtgacggac
cacggcaacatgtttggcgccatcgacttctacaagaaggccaaggacgccggcatcaag
cccatcctcggcatggaggcctacgtcgcgggccccaaggggcgcgaggaccgctcggag
aaggtgtcccatcacctcatcctcgtggcgaagaacgcggagggctacgccaacctccgc
tacctctcctccaccgcgtacatgcaggggttctactaccacccccgcatcgacaagaag
gtgctcgccgagcacagcaagggcctcttcgccctcaccgcgtgcctcggcggtgaagtc
accagcgcgtgcttccgcggcgacatggaccacgcccgcagggccgcgcaggagtacaag
gacatcttcgagcccgggcacttcttcctcgaggtgcagtccaacgggatgcccgagcag
gacaaggccaacgagaacctcaagcagctctcgcgggacatggacatcccgctgtgcgcc
accgcggacgcgcactacatcaagcgcgaggacgcgcgcgcgcacgagctgctcatgtgc
atcgccagcggcaagacgctggcggacggcaagcgcctgaagcactccacggacaagctc
tacgtcaccagccccacggagatgctggaggccttcaaggacatccccgaggccgtccac
aacacgcagcgcatcgccgagcagtgcaacctggaattgaagctgggcaagcccatgctg
cccaccttcaaggtgcccgacagccacacgccggacagcttcatggcggagctcgcctac
gagggcctgcgcgagcgcttcaccgagctggcccacaccgtcacgtaccccatcgaccgc
gaggtgtacctggaccgcctcaagctggagattggcgtcatccagaagatgggcttcagc
ggctacttcctcatcgttcaggacttcatcaactgggcgaagaagcagggcatccccgtg
ggcccgggccgtggctccggcgccggcagcctcgtggcctacgcgctgcgcatcaccgac
gtggaccccattccgtacaacctcctgttcgagcgcttcctcaacccggagcgcgtgtcg
atgccggacttcgatatcgacttctgccaggaccgccgcgacgaggtcatcaagtacgtc
ggccgcaagtacggcgagatgaacgtggggcagatcatcaccttcggctcgctcaaggcg
aagagcgtgctgcgcgacgtgtgccgcgtcttcgcgctcccgttcagcgaaggtgaccgc
atcgccaagctggtgccggaagtcctcaacatcaccttgaaggaggccatcgagatggag
cctcgcctcaaggagatgatggagacgccctccaacctcggcgaagtggagggccgcccc
gtcaccaccaaggacgtgctcgaaatcgcgctcgcgctggagggcctgcaccggcagccc
ggcatgcacgcggccggcgtggtgattgcggacaagccgctctgggagttcgtgcccgtc
taccagccgcccggtgagaagacgctcatcacccagttcgccaaggacgaggtggaggcc
gcgggcctggtgaagttcgacttcctcggcctgaagacgctcaccgtcatccagcacgcg
ctggatttggtgaagcgcaaccacggcaaggacattccgcgccacgagattccgctcaac
gacgacaaggtctgggagctgatggccaagggcgacacggccggcgtcttccagatggag
tccagcggcttcacggaaatggtggtgaagctgcggccgtcctgcttcgaagacgtcatc
gccgccggcgcgctctaccgcccgggtccgctggactccggcatggtggacgtcttcatc
aaccgcaagcacggccgcgagaaggtgtcgtatccgcaccccgcgctggagccggtgctc
aaggacacgtacggcgtcatcgtgtaccaggagcaggtgatgcagatttcgcaggtcctg
ggtggctacaccctgggccgcgcggacctgctccgccgcgccatgggcaagaagaaggcc
gaggtcatgcaggccgagcgcgccggcttcctcgagggctgcgcgaagaacaatgtcgac
ctgaaggtggccggcgaaatcttcgacctcatggagaagttcgccgagtacggcttcaac
aagagccactcggcggcgtacggcctcgtcaccatccacaccgcgtggctgaaggcgcac
tacccctgcgagttcatggcggcccttctctcctcggagaaggacaacaccgacaaggtg
gtgaagcacatcagcgaggcgcgcgagtcgggcctcgcggtgctgccgccggacgtgaat
cagtcggacctgcacttcggcgcggtggaggggaagattcgcttcggcctcggcgccatc
aagggcgtgggcgagggcgcgattgagtcgattctggaggcgcgcaaggacggccccttc
aagagcctcttcgacttctgcgagcgcgtggacagccgcaaggtgaaccgcaaggtgctg
gaggcgctggtgaaggcgggctccttcgacttcgagaagcgcccgcgccggcagctcttc
gacacgattgagaaggcgatgaaccgcggttcgtccagccagaaggacaaggccgcgggg
cagagctcgctgttcggcatgctggccggtccgtcctcgggcagcggcggtgggctgaag
gacgactacgtcgcggtggaggagtggacggagaaggagcggctggcgctggagaaggag
gccatcggcttctacgtgtccggccatccgctgcaccagtacgacaaggagctcaagcgc
tacgccaagccgattacggcggtgcagcgcgcgcgcaaggacgacaagctcaccgtggcg
ggcatcgtcaccatcctccgcgagcggcccaccaagacgggcaagcgcatggcgtgggtg
acgattgaagacctgtccggttcgattgagctggtgtgcttcccgggcaaggagggcacg
cgcaacgtgatgggcaaggacggcaagtggtccaagcaggggcccaagccgggcttcgag
aactgggagcacctgctcaagtcggacgaccccatcctggtgacgggcacggtccaaatc
agtcagcgcgacgaggagtcgcccacgccggagctcatcgtggacgacatccagagcctc
aaggcggtgcgcgagaagcgcacgaagcggctggagttgcgagtgcccgcggacctgctc
accgaggagcgcgtggcgaagctgcaggagctggcgaagaagtacgcgggcgccacgccg
gtggccgtcagcgtgctcttccagggcgagggggaagcgctcattggcaacacgtccatc
aaggtgcaggtgaatgacgacctgctgacggcggtggaccggctgttcggcatgcgcgtg
gtggagttcggctga
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integrated database retrieval system
