Pyxidicoccus parkwayensis: JY651_02390
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Entry
JY651_02390 CDS
T09992
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JY651_02390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppak02022
]
JY651_02390
02035 Bacterial motility proteins [BR:
ppak02035
]
JY651_02390
Two-component system [BR:
ppak02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
JY651_02390
Bacterial motility proteins [BR:
ppak02035
]
Pilus system
Twitching motility proteins
JY651_02390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
MCM
AAA
Mg_chelatase
AAA_16
AAA_3
DUF2773
AAA_22
Parvo_NS1
ATPase
AAA_7
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
QSQ23853
UniProt:
A0ABX7NYR2
LinkDB
All DBs
Position
636683..638119
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AA seq
478 aa
AA seq
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MTTSQAGEGGVRGHVLVVDDELSMREYLELLLHREGYAVTSVPGVKPACEALAQDGVDLV
ISDMKLGTGSGLDVLRAARARQEPPEVVLITAYGSPAAAVEAMREGAYDYICKPFDNEEL
RLLVQKALEKRLLRQENSGLRARLLPGLGVAVGQSSRMQAVWALVEKVAPSRSTVLVTGE
SGTGKELVARAIHMRGSRAAQPFLPFNCAALNEGTLESELFGHMKGSFTGATHERQGLLV
SAGEGTVMLDEVGEMPLATQVKLLRVLQERKVKPVGSAAEVPFKARVIAATNRRLEAEVK
AGRFREDLFYRLNVITVELPPLRERAGDISMLANYFLSRLAEELGRPGLRFAPETLSLLE
RYSFPGNVRQLQNMVERAATLSDSDLLGPATLPPAVRGESEPLASSSDGGETRLGAGFNL
ERHLDDSERRYLLAALKQAGGVKTRAAELLGLSFRSFRYRLAKHGLTDELEPGGATES
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacttcgcaggcaggggagggtggagtgcgcgggcacgtcctcgtggtggacgac
gagctgtccatgcgggagtacctggagctgttgctccaccgcgagggctacgcggtgacg
agcgtgcccggcgtgaagcccgcgtgcgaggcgctcgcgcaggacggggtggacctcgtc
atctccgacatgaagctgggcactggcagcggcctggacgtgctgcgcgccgcgcgcgcc
cgccaggaacctcccgaggtggtgctcatcaccgcctatggctcgccggccgccgcggtg
gaggccatgcgcgagggcgcgtacgactacatctgcaagcccttcgacaacgaggagttg
cggctgctcgtccagaaggcgctggagaagcgcctgctgcgccaggagaacagcggtctg
cgcgcccggctgctgcccggcctgggcgtggcggtggggcagagctcgcgcatgcaggcg
gtatgggccctggtggagaaggtggccccgagccgcagcacggtgctggtgacgggtgag
agcggcaccggcaaggagctggtggcccgcgccatccacatgcggggcagccgcgccgcg
cagcccttccttcccttcaactgcgcggccctcaacgagggcacgctggagagcgagctg
ttcggccacatgaagggctccttcaccggggccacccacgagcggcaggggctgctggtg
tccgcgggcgagggcaccgtcatgttggatgaagtcggcgagatgcccctggccacgcag
gtgaagctcttgcgcgtgctccaggagcggaaggtgaagcctgtgggcagcgcggcggag
gtgcccttcaaggcccgcgttatcgcggccaccaaccggcggctggaggcggaggtgaag
gcgggccgcttccgcgaggacctcttctatcgcctcaacgtgattacggtggagctgcct
cccttgcgcgagcgcgccggggacatctccatgctggcgaactacttcctgtcgcgcctg
gcggaagagctggggcgtccgggcctgcgcttcgcgccggagacgctttcgttactggag
cgttactcgttccctggcaacgtgcgccagctccagaacatggtggagcgcgcggccacg
ctgtccgactcggacctgctcggccccgccacgctgcccccggcggtgcgcggcgagtcc
gagcccctggcttcctccagtgacggaggcgagacgcggctgggtgcgggcttcaacctg
gagcgccacctggatgacagcgagcggcgctacctgctcgccgcgctgaagcaggcgggt
ggggtgaagacgcgggccgcggagctgctgggcctgtccttccggtccttccggtatcgc
ctggccaagcacggcctgacggatgagctggagccgggtggggccaccgagtcctag
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