Pyxidicoccus parkwayensis: JY651_03230
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Entry
JY651_03230 CDS
T09992
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JY651_03230 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppak03021
]
JY651_03230 (rho)
03019 Messenger RNA biogenesis [BR:
ppak03019
]
JY651_03230 (rho)
Transcription machinery [BR:
ppak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JY651_03230 (rho)
Messenger RNA biogenesis [BR:
ppak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JY651_03230 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
Spore_III_AA
NACHT
OB_RNB
AAA_22
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QSQ24006
UniProt:
A0ABX7P011
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All DBs
Position
825423..827033
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AA seq
536 aa
AA seq
DB search
MRKARTSREKVVATEVEADEKPRRKRAAKTADRDETEKPTRTRRARRDDEAAAEPEVAAE
PPRPVLTPISRPVRDDDLQEARISGGEEEQPAASLAPAPEAPEAPAITEVTRDGAPMQVI
KLNDLKRMKITDLAKMAHDTGIEGYQGLKKQDLIFALLGGIADKRFEVHAEGVLELLSDG
FGFLRSADSDYQPSPDDIYVSPSQVRRFNLRPGDTVTGPIRQPREGERFFALQKVDKVNF
ADPMSDAARERILFDNLTPLYPTRKLKLEHESSEMTTRIIDMFCPIGLGQRCLIVAPPKA
GKTVLLQNIAHAISRNHPDVYLIVLLVDERPEEVTDMERSVRGEVVSSTFDEPATRHVQV
AEMVIDKAKRLVEQKYDVCILLDSITRLARAYNTVVPASGKILSGGVDANALHKPKRFFG
AARNIEEGGSLTIIGTALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLMEKRIFPTLDINK
SGTRKEELLLSPGDLVRITALRQVLHPFTPIDAMEFVLKHMRPTASNADFLGSMNR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagcccgtacttcgagagagaaggttgtcgccaccgaggtggaggccgacgag
aagccccgccgcaagcgtgcggcgaagacggccgaccgggacgaaaccgagaagcccacc
cgcacccgccgtgcccgccgcgacgacgaggccgccgccgagccggaggtcgccgccgag
ccgccccgcccggtactcacccccatttcccgccccgtgcgcgacgacgacctgcaggag
gcgcgcatctccggcggtgaagaagagcagccggccgcctccctggcgcctgctccggag
gcccccgaggcccccgcgattacggaagtcacgcgcgacggcgcgccgatgcaggtcatc
aagctgaacgacctgaagcggatgaagatcacggacctggcgaagatggcccacgacacg
ggcatcgagggctaccagggcctgaagaagcaggacctcatcttcgcgctgctcggcggc
atcgcggacaagcgcttcgaggtccacgcggagggcgtgctggagctcctcagcgacggc
ttcggcttcctgcgcagcgcggacagcgactaccagccgagcccggacgacatctacgtc
tccccgtcgcaggtgcgccgcttcaacctgcggcccggcgacacggtgacgggccccatc
cgccagccgcgcgagggcgagcgcttcttcgcgctgcagaaggtggacaaggtcaacttc
gcggacccgatgtcggacgcggcgcgcgagcgcatcctgttcgacaacctcacgccgctc
tatccgacgcgcaagctcaagctggagcacgagtcgtcggagatgaccacgcgcatcatc
gacatgttctgccccatcggcctgggccagcgctgcctcatcgtcgcgccgccgaaggcc
ggcaagacggtgctgctgcagaacatcgcgcacgccatcagccgcaaccacccggacgtc
tacctcatcgtgctgctcgtggacgagcgccccgaggaagtgacggacatggagcgcagc
gtgcgcggcgaggtggtgtcctcgacgttcgacgagcccgccacgcgtcacgtgcaggtg
gcggagatggtcatcgacaaggccaagcgcctcgtcgagcagaagtacgacgtctgcatc
ctgctggactcgattacgcgtctggcgcgcgcctacaacacggtggtgcccgcgtccgga
aagattctgtccggcggcgtggacgccaacgcgctccacaagccgaagcgcttcttcggc
gccgcgcgcaacatcgaggagggcggctcgctgaccatcatcggcaccgcgctcatcgac
accggcagccgcatggacgaggtcatcttcgaggagttcaagggcaccggtaactccgaa
atcgtcctggaccggaagctgatggagaagcgcatcttcccgacgctggacatcaacaag
tccggtacgcgcaaggaggagctgctcttgtcaccgggcgacctcgtgcgcattacggcg
ctgcgccaggtcctccatccgttcactccgattgacgcgatggaatttgtgctcaagcac
atgcgtccgacggcgtcgaacgccgacttcctcggctcgatgaaccggtaa
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