Pyxidicoccus parkwayensis: JY651_03430
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Entry
JY651_03430 CDS
T09992
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak00470
D-Amino acid metabolism
ppak00550
Peptidoglycan biosynthesis
ppak01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JY651_03430 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JY651_03430 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppak01011
]
JY651_03430 (murD)
Enzymes [BR:
ppak01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JY651_03430 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppak01011
]
Precursor biosynthesis
Amino acid ligase
JY651_03430 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QSQ24044
UniProt:
A0ABX7NYW3
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All DBs
Position
868332..869732
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AA seq
466 aa
AA seq
DB search
MTLSLSGQKVLVYGLAKSGVAALRLLRHHGAQVTALDARTEEALGDVGREVKALGASLVT
GPTPPGLLASQDLVVVSPGVPLSLPEFETARKAGVAIWGEVELAARLLTDVPLFGITGTN
GKSTTTALTGELFIRGGRRTFVGGNLGRPFSEAAMAPKDWDALVVELSSFQLEGIRTLRP
RGAAILNLTPDHLDRYATHADYGAAKARIFQNQQGLTAQPGQNPQAGDFGVVNADDADVM
GLARTAKVPVYGFSMTGKPVVDAPKLAGLAIAEEGGFRLDFLGEHYRLTNRALRGAHNAQ
NAMAAALLARLGGVAADAVQAGLDSYPGLPHRMESVRVLDGVEWVNDSKATNVDSVLVAL
RAFKGDLWLIAGGKGKGAPYAPMVDAGRGKVKGVLTIGQDADTIAKAYAGQAPVLACGTL
DAAVKKAREVAKAGDTVLLSPACASYDQFKNFEDRGDTFKRLVGAL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgtcgctgtccggtcagaaggtgctcgtatacggcctcgcgaagagtggcgtg
gcggcgctgcgcctgctgcgccaccacggcgcgcaggtgacggcgctcgacgcgcgcacc
gaggaagcactcggtgacgtgggccgcgaggtgaaggccctcggcgcttcgctcgtcacc
ggccccacgccgccgggcctgctcgcctcgcaggacctcgtggtggtgagccccggcgtg
ccgttgtcgctgccggagttcgagacggcgcgcaaggcgggcgtcgccatctggggcgag
gtggagctggccgcgcgtctcctcaccgacgtgccgctgttcggcatcaccggcaccaac
gggaagagcaccaccacggcgctcaccggcgagctgttcattcgcggcggccggcgcacc
ttcgtgggcggcaacctgggccggcccttctccgaggccgccatggccccgaaggactgg
gacgcgctggtggtggagctgtccagcttccagctcgagggcatccgcaccctgcgcccg
cgcggcgccgccatcctcaacctcacgccggaccacctggaccggtacgccacgcacgcc
gactacggcgctgcgaaggcgagaatcttccagaaccagcagggcctgacggcccagccg
gggcagaacccgcaggccggtgacttcggtgtcgtcaacgcggacgacgcggacgtgatg
ggcctggcgcgcacggcgaaggtgcccgtgtatggcttcagcatgacgggcaagccggtg
gtggacgcgccgaagctcgcgggcctggccatcgcggaggagggcggcttccggctggac
ttcctcggcgagcactaccgcctcaccaaccgcgcgctgcgcggcgcgcacaacgcgcag
aacgccatggcggcggcactgctggcgcggctgggcggcgtggcggcggacgcggtgcag
gcggggctggacagctacccgggcctgccccaccgcatggagagcgtgcgcgtgctggac
ggcgtggagtgggtgaacgactccaaggccaccaacgtggactcggtgctggtggcgctg
cgcgccttcaagggcgacctgtggctgattgccggcggcaagggcaagggcgcgccgtac
gcgcccatggtggacgcggggcgcggcaaggtgaagggcgtgctcaccatcggccaggac
gcggacacgattgcgaaggcctacgcgggccaggcgccggtgctcgcgtgcggcacgctg
gacgcggcggtgaagaaggcgcgtgaagtggcgaaggcgggggacacggtgctgctgtcg
cccgcgtgcgcgtcgtacgaccagttcaagaacttcgaggaccggggcgacacgttcaag
cgcctcgtcggggcgctgtga
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