Pyxidicoccus parkwayensis: JY651_06730
Help
Entry
JY651_06730 CDS
T09992
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
ppak
Pyxidicoccus parkwayensis
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppak03000
]
JY651_06730 (rtcR)
Transcription factors [BR:
ppak03000
]
Prokaryotic type
Other transcription factors
Others
JY651_06730 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_lid_14
AAA_16
AAA_22
NACHT
T2SSE
AAA_30
AAA_2
ATPase_2
AAA_19
AAA_29
AAA_7
MCM
AAA_14
ABC_tran
AAA_18
N_formyltrans_C
Motif
Other DBs
NCBI-ProteinID:
QSQ24638
UniProt:
A0ABX7P2N8
LinkDB
All DBs
Position
complement(1709966..1711615)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKTLARKTVVLGMLGTTLDTGQGPQRWAKWRPTVALCQQEDLVVHRLELLHPPNAVSIA
GTLLADIGQVSPETEVRPTVLDIRNPWDLEETYGALLDYVRGYTFNPEEEDYLVHITTGT
HIAQICMFLLVESRLIPGRLVQVSPGGTGRERSGPGSHTLIDLDLSQYDTLAARFRQEQR
EGLSFLKAGIDTLNPAFNRLIERIEQVAVQSKAPLLITGPTGAGKSQLARRVYALKKARR
GVAGPFVDLNCATLRGDGAMSALFGHVKGAFTGALQDRPGLLRQANGGVLFLDEIGELGA
DEQAMLLRALEDKRFLPVGSDKEVESDFQLIAGTNRDLQAEVERGRFREDLLARINLWTF
RLPALRERPEDIPPNLLYELDQASEAMGARVTMNKEAQERFLGFATSPDARWSGNFRDLN
AAVLRMATLAAGGRITREVVDEELARLREQWRPAGARAADSRTGATDLVAEILGEDLARE
LDRFDRVQLADVLSVCRASRTLSDAGRVLFAQSRAQKKSVNDADRLKKYLARFGLTWADV
SGRGAAEVA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagactctggcgcgcaagacggtggtcctcgggatgctggggacgacgctggac
acgggacaggggccgcagcggtgggcgaagtggcggcccacggtggcgctgtgccagcag
gaggacctggtggtgcaccggctggagttgctgcacccgcccaacgcggtgtcgattgca
ggcacgctgctggcggacatcggccaggtgtcaccggagacggaggtgcggcccacggtg
ctggacatccgcaacccgtgggacctggaggagacgtacggcgcgctgctcgactacgtg
cgcggctacaccttcaaccccgaggaggaggactacctcgtccacatcaccacgggcacg
cacatcgcgcagatctgcatgttcctcctggtggagagccggctcatccccgggaggctg
gtgcaggtgtcgcccgggggcaccgggagagagcgctccggtccgggctcacacacgctc
atcgacctggacctgtcgcagtacgacacgctggccgcgcgcttccggcaggagcagcgc
gagggtctgtccttcctcaaggccggcatcgacacgctcaaccccgccttcaaccggctc
atcgagcggattgaacaggtggccgtacagtcgaaggcaccgctcctgattacgggcccc
acgggcgcgggcaagtcgcagctcgcgcgccgcgtctacgcgctgaagaaggcgcggcgc
ggtgtggccgggcccttcgtggacctcaactgcgccacgctgcgcggtgatggcgccatg
tccgcgctcttcggccacgtaaagggagcgttcaccggcgcattgcaggacaggcccggt
ctgctgcggcaggcgaatggtggcgtgctgttcctcgacgagattggcgagctgggcgcg
gacgagcaggccatgttgctgcgcgcgctggaggacaagcgcttcctgccggtgggctcg
gacaaggaggtggagagcgacttccagctcatcgccggcaccaaccgcgacctccaggcg
gaggtggagcgcgggcgcttccgggaggacttgctcgcgcgcatcaacctgtggaccttc
cggctgcccgcgctgcgcgagcgtccggaggacattccgcccaacctcctctacgagctg
gaccaggcctccgaggccatgggcgcgcgcgtcaccatgaacaaggaggcgcaggagcgg
ttcctcgggttcgccacgtcgccggatgcgcggtggtccggcaacttccgggacttgaat
gccgccgtgctgcgcatggccacgctcgccgccggtgggcggattactcgcgaggtggtg
gacgaggagcttgcccggctgcgcgagcagtggcgtccggcgggggcgcgtgccgccgat
tcacgcaccggtgcgacggacctggtggcggagattctgggcgaggacctggcgcgagag
ctggacaggttcgaccgtgtgcagctcgcggacgtgctgagcgtgtgccgggcgtcgcgc
acgctttcggacgccggacgcgtgctgttcgcgcagtcgcgtgcgcagaagaagagcgtc
aacgacgcggaccggctgaagaagtacctcgcgcgcttcggcctcacgtgggcggacgtc
agcgggcgcggcgctgctgaagtggcctga
DBGET
integrated database retrieval system
