KEGG   Pyxidicoccus parkwayensis: JY651_08290
Entry
JY651_08290       CDS       T09992                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppak  Pyxidicoccus parkwayensis
Pathway
ppak00740  Riboflavin metabolism
ppak01100  Metabolic pathways
ppak01110  Biosynthesis of secondary metabolites
ppak01240  Biosynthesis of cofactors
ppak02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppak00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    JY651_08290 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JY651_08290 (ribD)
Enzymes [BR:ppak01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     JY651_08290 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     JY651_08290 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD TilS
Other DBs
NCBI-ProteinID: QSQ24926
LinkDB
Position
2084221..2085384
AA seq 387 aa
MRLLTRARMDATRAPRAKRAADFDRAVAEFFMRIALEEAAKGLGRTSPNPVVGAVLVKGG
RIIARGYHKKAGTAHAEVVALEAAGSKAKGADLYTTLEPCDHYGRTPPCSLAILEAGVRR
VICASSDPNPQVSGKGVARLRRGGVQVLTGVLTEEADTLNRPFFKVMRTGLPWVTLKAAV
TLDGKLATATGDSRWVTGEPARAWVHRLRDAVDVILVGANTVRKDDPKLTTRLPGGGGKD
PLRVVVDSHLRLSPGYTVFTQRSPARTVIATLEDPEGRKARRFLAQGVEVWQVRQKAGRV
DLKALLKRIAKSGLNHVLVEGGAELYGSFLREHLADSLALFLAPKLIGSPGLSWAGDLGV
KEMAQAVSVSDLTFERHGDDVLLQALL
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgcggctgctgacgcgggcacggatggatgcaacgagggcgccccgggcgaagcgggcg
gcggacttcgaccgcgccgtggccgagttcttcatgcgcatcgccctggaggaggcggcc
aagggcctgggccgcacgagccccaatccggtggtgggcgcggtgctggtgaagggcggc
cgcatcatcgcccgcggctaccacaagaaggcgggcacggcgcacgcggaagtcgtggcg
ctggaggcggcgggctcgaaggcgaagggcgcggacctctacacgacgctggagccgtgc
gaccactacgggcgcacgccgccgtgcagcctggcgattctggaggccggggtgcggcgg
gtcatctgcgcgtcctcggaccccaatccgcaggtgagcggcaagggcgtggcgcggctg
cggcgcggcggggtgcaggtgctcacgggcgtcctcacggaagaggcggacacgctcaac
cggcccttcttcaaggtcatgcgcacgggcctgccgtgggtgacgctgaaggcggcggtg
acgctggacgggaagctggccaccgcgacgggggactcgcgctgggtgacgggcgagcct
gcgcgcgcgtgggtgcaccggctgcgcgacgcggtggacgtcatcctcgtgggcgccaac
acggtgcgcaaggatgacccgaagctgacgacgcggcttccgggcggcggaggaaaagac
ccgctgcgcgtggtggtggatagccacctgcgcctgtctccgggctacaccgtcttcacg
cagcgaagccccgcgcgcacggtgattgcgacgctggaggacccggagggccgcaaggcg
cggcgcttcctcgcccagggcgtggaggtgtggcaggtacgccagaaggcgggccgggtg
gacctgaaggcgctcctcaagcgcatcgcgaagagcggcctcaaccacgtgttagtggag
ggtggggcggagctgtacggctcgttcctgcgcgagcacctggcggactcgctggcgctg
ttcctcgcgcccaagctgattggcagcccgggtctgtcgtgggcgggggacttgggcgtg
aaggagatggcgcaggccgtgtccgtgagcgacctcaccttcgagcgtcacggggacgac
gtgctgttgcaggcgctgctgtag

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