Pyxidicoccus parkwayensis: JY651_13430
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Entry
JY651_13430 CDS
T09992
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppak
Pyxidicoccus parkwayensis
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppak03016
]
JY651_13430 (truD)
Enzymes [BR:
ppak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JY651_13430 (truD)
Transfer RNA biogenesis [BR:
ppak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JY651_13430 (truD)
Prokaryotic type
JY651_13430 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QSQ25861
LinkDB
All DBs
Position
complement(3455321..3456850)
Genome browser
AA seq
509 aa
AA seq
DB search
MRIKQKPEDFSVKESYRFDEVDTGRHRVYLMDKQKLSTFDAVARLRDAFGLKPGAISYCG
LKDKQGRTEQIIAVDGADVDMQEPDLRLKYLGRTDKPLSAANITSNRFSVTVRSLSTGSL
GPLNVATAEVNRLGVVNYFDSQRFGSLKHGQGFIAKDLIRGDFEAALHNYLAAPSELDRT
EDAKVKAFWRDNWGQWNARVPYEGTRKYHRILKSLREEPKDFVRAFMQIDSDYRAMLLFT
YQSYLWNEGVRRYLQLLLPREHLFPLRYQAGTLLFHRDASAEVLRTLRDATFPLLAPDST
FTDPKVEEAVKWVLGKEKLKLSDLRIEEEPRRLFFKHEERPLLVFPHKLVIGRTQDDELN
RGNVKVNVAFTLPPGAYATLVIKRLFHFEYAEDTPEVIRASQRPRFVEMEQAGADRERRG
APAGREERGARAPSDSRRRPSAGREERAPETPSRHRTLAGQKQAAEPKEAPAEPLGFRER
QRRRKAAREVARSETEAKRAAKASKSRKK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatcaaacagaagcccgaagacttctccgtcaaggagtcctaccgtttcgacgag
gtcgacacgggacgtcaccgcgtctacctcatggacaagcagaagctgtccaccttcgac
gcggtggcccggctgcgggacgccttcggcctcaagcccggcgccatcagctactgcggc
ctcaaggacaagcagggccgcaccgagcagatcatcgccgtggacggcgccgacgtggac
atgcaggagcccgacctgcgcctgaagtacctgggccgcacggacaagcccctgtctgcc
gccaacatcacctccaaccgcttctccgtcaccgtgcgctcgctgagcaccgggtcgctg
gggcccctcaacgtcgccaccgccgaggtcaaccgcctgggcgtggtgaactacttcgac
agccagcgcttcggctcgctgaagcacggccagggcttcatcgccaaggacctcatccgc
ggcgacttcgaggcggccctgcacaactacctcgccgcgccctcggaattggaccgcacc
gaggacgccaaggtgaaggccttctggcgcgacaactggggccagtggaacgcgcgcgtc
ccctacgagggcacgcgcaaataccaccgcatcctcaagtccctgcgcgaggagccgaag
gacttcgtgcgcgccttcatgcagatcgactcggactaccgggcgatgctgctcttcacg
taccagagctacctctggaacgagggcgtgcggcgctacctccagttgctactgccgcgc
gagcacctgttccccctgcgctaccaggccggcacgctgctgttccaccgcgacgccagc
gcggaggtgctgcgcaccctgcgcgacgccaccttcccgctgctcgcgccggactccacc
ttcacggaccccaaggtcgaagaggccgtgaagtgggtgctgggcaaggagaagctcaag
ctctccgacctgcgcatcgaggaggagccgcgccggctcttcttcaagcacgaggagcgg
ccgctgctcgtcttcccgcacaagctcgtcatcggccgcacgcaggacgacgagctcaac
cggggcaacgtgaaggtcaacgtcgccttcaccctgccccccggcgcgtacgccacgctc
gtcatcaagcgcctcttccacttcgagtacgccgaggacaccccggaggtcatccgcgcc
agccagcgcccgcgcttcgtggagatggagcaggccggagcggaccgcgagcgccgcggc
gctcccgcgggccgtgaggagcgtggcgcccgggccccgtcggactcccgccgccgcccg
tccgccggccgcgaggagcgcgccccggagaccccgtcccgccaccgcaccctggccggc
cagaagcaggcggccgagcccaaggaggcccccgccgagcccctgggcttccgcgagcgg
cagcgccgccggaaagccgcacgggaagtggcgcgatctgaaaccgaggccaagcgggcg
gccaaggcctcgaaatcacggaagaaatag
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