Pyxidicoccus parkwayensis: JY651_16875
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Entry
JY651_16875 CDS
T09992
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak00020
Citrate cycle (TCA cycle)
ppak00190
Oxidative phosphorylation
ppak00650
Butanoate metabolism
ppak00720
Other carbon fixation pathways
ppak01100
Metabolic pathways
ppak01110
Biosynthesis of secondary metabolites
ppak01120
Microbial metabolism in diverse environments
ppak01200
Carbon metabolism
Module
ppak_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppak_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JY651_16875 (sdhA)
00650 Butanoate metabolism
JY651_16875 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
JY651_16875 (sdhA)
00720 Other carbon fixation pathways
JY651_16875 (sdhA)
Enzymes [BR:
ppak01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JY651_16875 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
NAD_binding_8
DAO
FAD_binding_3
GIDA
Phasin_2
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QSQ28132
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All DBs
Position
complement(4522038..4523915)
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AA seq
625 aa
AA seq
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MAAAARFTVVGGGLAGLMTTIKLAEAGHQVDVLSLVPVKRSHSVCAQGGINGAVNTKGEG
DHPDIHVKDTLRGGDFLAEQTSVKGMCYAAPGIIYLLDRMGVTFNRTPEGLLDFRRFGGT
LHHRTAFAGATTGQQLLYALDEQVRRYESEGKVTKYEYWEWLGTVKDEGGRVIGSVAVDL
RTMEIRTFPAEAVCLATGGPGIVFGRSTNSIINTGTAAGRAFMEGAIYANGEFIQVHPTS
IPGEDKLRLMSESVRGEGGRVWVPRKKGDTRNPRDIPESERFYFLEEKYPKYKNLVPRDV
ATREIFMVCRDLGMGIGGRDGVYLDVTHIPAKTLDAKIKGVMEIYEKFVGDDPRVTPMVI
FPGMHYSMGGLYVRFEADPKTQTPAEGSPINQSTNIPGLYATGEADYAFHGANRLGANSL
LSCIYSGMIGGPAMAAFAKNNATSAAAMPEKYFQDAKRYWEDRFATIKKMNGAENPYALA
RELGDIMTENCTVVRYNDRLKKTVEKIRELKTRWNNVNVLDTGNVANRALSYTNQLWNML
ELGEVIATSALLRDESRGAHYKPEFSLPEPKSKDPREDPEWMALWKKRHEKWAKTTIAKH
SEQGPQISYEEIPTPVLEPEPRWYA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcagcgcggttcacggtggtgggcggcggtctcgcggggctgatgacgacg
atcaagctcgccgaggcgggtcaccaggtggatgtgctctcgctcgtcccggtcaaacgt
tcccactcggtttgcgcccagggcggcatcaacggtgcggtgaacaccaagggcgagggt
gaccatccggacatccacgtgaaggacacgctgcgcggcggcgacttcctcgcggagcag
acgtccgtgaagggcatgtgctacgcggcccccggcatcatctacctgctggaccgcatg
ggcgtgacgttcaaccgcacgccggaaggcctgctggacttccgccgcttcggcggcacg
ctccatcaccgcacggccttcgcgggcgccaccaccggccagcagctgctctacgcgctg
gacgagcaggttcgccgctacgagtccgagggcaaggtcaccaagtacgagtactgggag
tggctcggcacggtgaaggacgagggcgggcgcgtcatcggcagcgtggccgtggacctg
cggaccatggagatccgcaccttcccggccgaggccgtgtgcctcgccaccggtggcccg
ggcatcgtcttcgggcgctccaccaactccatcatcaacaccggcaccgccgccggccgc
gccttcatggagggcgccatctacgccaacggcgagttcatccaggtgcaccccacctcc
attccgggtgaggacaagctgcgcctgatgagcgagtccgtgcgtggcgagggcggccgc
gtctgggtgccccggaagaagggcgacacgcgcaacccccgggacatcccggagagcgag
cgcttctacttcctggaggagaagtaccccaagtacaagaacctggtgccccgcgacgtg
gccacgcgagagatcttcatggtctgccgcgacctgggcatgggcatcggtggcagggac
ggcgtgtacctggacgtcacgcacatcccggccaagacgctggacgccaagatcaagggc
gtcatggagatctacgagaagttcgtgggagacgacccgcgcgtcacgccgatggtcatc
ttcccgggcatgcactactccatgggcggcctgtacgtgcgcttcgaggcggacccgaag
acgcagacccccgccgagggcagccccatcaaccagtccaccaacatccccggcctgtac
gccacgggtgaggcggactacgcgttccacggcgcgaaccgcctgggcgccaactcgctc
ctgtcctgcatctactcgggcatgatcggcggcccggcgatggcggccttcgcgaagaac
aacgccaccagcgcggcggcgatgccggagaagtacttccaggacgcgaagcgctactgg
gaggaccggttcgccaccatcaagaagatgaacggcgcggagaacccctacgcgctggcg
cgcgagctgggcgacatcatgacggagaactgcaccgtcgtccggtacaacgaccggctg
aagaagacggtggagaagatccgcgagctgaagacgcgctggaacaacgtcaacgtgctg
gacacgggcaacgtggccaaccgcgcgctgtcgtacaccaaccagctctggaacatgctg
gagctgggcgaggtcatcgccaccagcgcgctgctccgcgacgagagccgcggcgcgcac
tacaagcccgagttctcgctgccggagccgaagtcgaaggacccgcgcgaggatcccgag
tggatggcgctgtggaagaagcgccacgagaagtgggcgaagacgaccatcgcgaagcac
agcgagcagggcccgcagatctcctacgaggagattcccacgccggtcctggagcccgag
ccccgctggtacgcctga
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