Pyxidicoccus parkwayensis: JY651_19235
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Entry
JY651_19235 CDS
T09992
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JY651_19235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppak03021
]
JY651_19235
03400 DNA repair and recombination proteins [BR:
ppak03400
]
JY651_19235
Enzymes [BR:
ppak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JY651_19235
Transcription machinery [BR:
ppak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JY651_19235
DNA repair and recombination proteins [BR:
ppak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JY651_19235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QSQ26916
UniProt:
A0ABX7P907
LinkDB
All DBs
Position
complement(5191760..5192782)
Genome browser
AA seq
340 aa
AA seq
DB search
MADTFVAKNWRDLIKPRRMEVDQDSLTPTYGKFVAEPLERGFGTTLGNSLRRVLLSSLQG
AAITSVKIEGVDHEFTTIPEVSEDVTDVVLNLKEVLLRMHTNETKTLRIEAEGPKEVKAG
DIITDPDTEILNPGHHICTISEGGKLRMELTCRRGRGYTPANSNKVAGSPIGTIPIDSLF
SPIRKVNYQVTNARVGQVTDFDKLSLEVWTDGSVSPQDAVAYAAKIIKEQLTVFVNFDET
EEPVIAEAPKEEAKLNENLFRSVDELELSVRSANCLQQANIKTIGDLVQRTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKQAPAPAQPKA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacgttcgttgcgaagaactggcgtgacctcatcaagccgcgccgcatggag
gtggaccaggacagcctgacgcccacctacgggaagttcgtcgcggagccgctggagcgc
ggcttcggcaccacgctgggcaactcgctgcgccgggtgctcctgtcgtccctccagggc
gcggccatcacctcggtgaagattgagggcgtggaccacgagttcaccaccatccccgag
gtgtccgaggacgtcacggacgtcgtgctgaacctgaaggaagtcctccttcggatgcac
acgaacgagacgaagacgctgcgcatcgaggcggaggggcccaaggaggtcaaggccggt
gacatcatcaccgacccggacaccgagatcctcaaccccggccaccacatctgcaccatc
tccgagggtggcaagctccgcatggagctgacgtgccgccgcggccgtggctacaccccg
gcgaactcgaacaaggtcgcgggctcgcccatcggcaccattcccatcgactcgctgttc
tcgcccatccgcaaggtgaactaccaggtcaccaacgcgcgcgtcgggcaggtcaccgac
ttcgacaagctgtccctcgaggtgtggacggacggctccgtgtccccgcaggacgcggtg
gcgtacgcggcgaagatcatcaaggagcagctcaccgtcttcgtgaacttcgacgagacg
gaggagcccgtcatcgccgaggccccgaaggaggaggcgaagctcaacgagaacctcttc
cgctcggtggatgagctggagctctcggtgcgctcggccaactgcctgcagcaggccaac
atcaagaccatcggcgacctcgtgcagcgcaccgaggccgagatgctcaagacgaagaac
ttcggccgcaagtccttgaaggagatcaaggagatcctcgcggagatgggcctgtcgctc
ggcatgaagctggagaactggccgccgaagcaggcgccggcgcccgcgcagcccaaggcc
tag
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integrated database retrieval system
