KEGG   Pyxidicoccus parkwayensis: JY651_19820
Entry
JY651_19820       CDS       T09992                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
ppak  Pyxidicoccus parkwayensis
Pathway
ppak02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppak00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JY651_19820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ppak02022]
    JY651_19820
Two-component system [BR:ppak02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   JY651_19820
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA Mg_chelatase AAA_7 AAA_16 AAA_2 MCM bpMoxR AAA_19 AAA_22 AAA_30 ThsB_TIR
Other DBs
NCBI-ProteinID: QSQ27023
LinkDB
Position
complement(5304188..5305840)
AA seq 550 aa
MDRIAVLVVDDEESVRTFLSELLGSAGYQVRSAASGAQALEMLSGGSFDAVLLDVVMPEM
SGLEVLRRYRGAGGTAPVIVLSALAGADDAVRAMKMGASDYLAKPFGNDELQDALARALG
TRAPERQAAAPGLPPRVASPIIDPAADAARVLISTSPSMRRARALVERIADTDVPVLLLG
ESGTGKEVIAREIHARSQRRGKPFIKVNCAALPGELLESELFGHERGAFTGATAEKPGKF
ELADQGTIFLDEIGEMAIRLQAKLLQVLQDEEFFRVGGKKSVRVDSRVVVATNRDLEKEI
ALGNFREDLYYRLNVVAIRLPPLRERREDVVPLTDHFLKKYGRNFINGVSELPREVLQAF
ADYDWPGNVRELENMVRRLCVLKDATLVLDELSAAGRAPASAPSLPTAYGGDDGTYGRVQ
EEPLRAPPSSSVQVLEMPTRGVSQSVASAVPVSAPAVLEPANSVIPTPRYMNPFDVPQPP
PPPAPTGDLSLKDIGKRAAMLAEREAILAMLQRTAWNKRRAATKLRISYKALLYKIKECG
IIDPRASAEL
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggatcggatcgcggtgctggtggtggatgacgaagagtcggtgcgcacgttcctgtcc
gagttgctcggcagtgcgggctaccaggtgcgcagcgccgcgagcggtgcgcaggctctg
gagatgctctcgggaggttccttcgacgcggtgctgctggacgtggtgatgccggagatg
agcggcctggaagtcctgcgccgctaccggggcgcggggggcaccgcgccggtcatcgtg
ctcagcgcgctggcgggcgcggacgacgcggttcgcgccatgaagatgggcgccagcgac
tacctggccaagcccttcggcaacgacgagctgcaggacgcgctggcccgggccctgggc
acgcgcgctccggagcgccaggccgcggcgccggggctgcctcctcgcgtggcctcaccc
atcatcgaccccgcggcggacgcggcgcgggtgctcatctccacgtcgccgtccatgcgc
cgggcccgcgcgctggtggagcgcatcgccgacacggacgtgccggtgctgctgctcggc
gagtccggtacgggcaaggaggtgattgcccgcgaaatccacgcgcgcagccagcggcgc
ggcaagcccttcatcaaggtgaactgcgcggcgctgcccggtgagctgctggagagcgag
ctgttcggccacgagcgcggcgccttcaccggcgccaccgcggagaagcccggcaagttc
gagctggcggaccagggcaccatcttcctggacgagattggcgagatggccatccgcctc
caggccaagctgctccaggtgctgcaggacgaggagttcttccgcgtcggcggcaagaag
agcgtgcgcgtggacagccgcgtggtggtggccaccaaccgcgacctcgagaaggagatt
gccctgggcaacttccgcgaggacctctactaccgcctcaacgtggtggccatccgcctg
ccgcccctgcgcgagcgccgtgaggacgtggtgccgctcacggaccacttcctgaagaag
tacggccgcaacttcatcaacggcgtgtcggagctgccgcgcgaggttctccaggccttc
gcggactacgactggcccggcaacgtgcgcgagctggagaacatggtgcgccggctgtgc
gtgctgaaggacgccacgctggtgctcgacgagctcagcgccgcgggccgtgctcccgcc
agcgcgccttcgctgcccaccgcgtacggcggtgacgacggcacctatggccgcgtgcag
gaggagccgttgcgcgcgccgccgtcctcgtccgtgcaggtgctggagatgcccacgcgc
ggggtttcgcagtcggtggcgtccgccgtgccggtgtcggccccggccgtgctggagccg
gccaactccgtcatcccgacgccgcggtacatgaatccgttcgacgtgccgcagccgcct
ccgcctcccgctccgacgggagacttgtcgctgaaggacatcggcaagcgggccgccatg
ctcgccgagcgcgaggcgattctggccatgctccagcgcaccgcctggaacaagcgccgc
gcggccaccaagctgcgcatcagctacaaggcgctcctgtacaaaatcaaggagtgcgga
atcatcgacccgcgtgccagcgcggagctgtaa

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