Pyxidicoccus parkwayensis: JY651_21095
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Entry
JY651_21095 CDS
T09992
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ppak
Pyxidicoccus parkwayensis
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppak03009
]
JY651_21095 (dbpA)
Enzymes [BR:
ppak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JY651_21095 (dbpA)
Ribosome biogenesis [BR:
ppak03009
]
Prokaryotic type
rRNA helicases
JY651_21095 (dbpA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QSQ27256
LinkDB
All DBs
Position
complement(5621764..5623152)
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AA seq
462 aa
AA seq
DB search
MDFAALPLAPPLLQVLEELEFKVATPIQAQSIPVLLQGQDLVGQAKTGSGKTAAFALPIL
QKVRLQDRRLQALVLCPTRELCAQVAGEIRRLARRLPGLQVLVLAGGQPIRPQVDALEKG
AHIGVGTPGRVMDLLDREVLETRQLATVVLDEADRMLDMGFREDMEHILAATPPKRQTVL
FSATFPPDIEALSRTFQKNPARVTVEEEKGTVPDIRQLRYDCALEEKPEMLLRLLRHYQP
GSAIVFCNHKIEVTKLTKTLTEAGVSADGLQGDLEQFERDRVMAKFRNGSTRVLIATDVA
GRGIDVEALDAVINFDLPQQPEPYVHRIGRTGRAGRAGLAMALVTPRDTRKLEDIEHATG
VKLEQGDVEVLPSADPRNAVKLEAAWETLCISAGRKDKMRPGDILGALTGEAGGLNASDV
GKIEIQDRLSYVAVAKRVARVAFQRLTEGRIKGRKARIERVR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgccgctctcccgctcgcaccgcccctgctccaggtcctggaggagctggag
ttcaaagtcgccacgcccatccaggcgcagagcatccccgtgctgttgcaggggcaggac
ctggtgggccaggcgaagacagggagcgggaagacggcggccttcgcgctgcccatcctc
cagaaggtgcggctccaggaccggcggctccaggcgctggtgctctgtcccacgcgcgag
ctgtgcgcgcaggtggcgggcgaaatccgccggctggcccgcaggctgccggggcttcag
gtgttggtgctcgcgggaggccagcccatccgcccgcaggtggacgcgctggagaagggc
gcgcacatcggcgtgggcacgccggggcgggtgatggacttgctggaccgcgaggtgctg
gagacgcggcagctcgccacggtggtgctggacgaggcggaccggatgctcgacatgggc
ttccgcgaggacatggagcacatcctcgccgccacgcctccgaagcggcagacggtgctc
ttctccgcgacgtttcctccggacatcgaggcgctgagccgcacgttccagaagaacccc
gcgcgcgtgacggtggaggaggagaagggcaccgtcccggacatccggcagctgcgctac
gactgcgcgctcgaggagaagccggagatgctgctgcgactcctccggcactaccagccg
ggctcggccatcgtcttctgcaatcacaagattgaggtcaccaagctgacgaagacgctc
accgaggcaggcgtgagcgcggacggcctccagggagacctggagcagttcgagcgagac
cgcgtgatggcgaagttccgcaacgggagcacgcgggtgctcatcgccacggacgtcgcg
ggacgtggcatcgacgtggaggcgctggacgcggtcatcaacttcgacttgccgcagcag
ccggagccgtatgtgcatcgcattggccgcacggggcgggcgggcagggcgggcctggcg
atggccctcgtcacgccgcgcgacacgcgcaagctcgaggacatcgagcacgccacgggt
gtgaagctggagcagggggatgttgaggtgctgccgtccgcggacccgcgcaacgcggtg
aagctggaggccgcgtgggagacgctgtgcatctccgcgggccgcaaggacaagatgcgg
ccgggagacatcctcggcgcgctgacgggcgaggccggagggctgaatgcctccgacgtg
gggaagattgaaatccaggaccgcctgtcctacgtcgccgtcgcgaagcgcgtcgcccgg
gtggcgttccagcggctgaccgagggacgcatcaagggccgcaaggcgcgcatcgagcgg
gtgcggtag
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