Pyxidicoccus parkwayensis: JY651_28195
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Entry
JY651_28195 CDS
T09992
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JY651_28195 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppak03019
]
JY651_28195 (pnp)
03016 Transfer RNA biogenesis [BR:
ppak03016
]
JY651_28195 (pnp)
Enzymes [BR:
ppak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JY651_28195 (pnp)
Messenger RNA biogenesis [BR:
ppak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JY651_28195 (pnp)
Transfer RNA biogenesis [BR:
ppak03016
]
Prokaryotic type
tRNA degradation factors
JY651_28195 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QSQ19220
UniProt:
A0ABX7NKB1
LinkDB
All DBs
Position
complement(7605975..7608143)
Genome browser
AA seq
722 aa
AA seq
DB search
MLKKSVTIGESELSIEVGRMAKQADGAVVVRYGDTMLLVTAVSAREKKDVDFLPLTVEYQ
EKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSLRPLFPEGYAYETQVIAGVISSDPEN
EGDIHGITGASAALWVSDIPFNGPLAGIRVGRVGGQLVANPTAKQREQSDLDLVMAVSRE
AIVMVEGGAEEVSEADMVAALEFGFKTAQPALDLQDELRRELKKQVRSFDKIPSVDEGLR
AKVRELAMDGIKAGYGIKEKGARYEALSKAKKDALAKLKEQLGEGYTPLVEKHAKQVVED
LKYEHMREMTVNGGRIGGRPHDVVRPITCEVGVLPRTHGSALFTRGETQALVVATLGTSE
DEQRLEMLGGMAFKRFMLHYNFPPFSVNETKPLRGPGRREVGHGALAERALRNMVPKSES
FPYTVRLVSDILESNGSSSMASVCGGTLALMDAGVPIKAPVAGIAMGLVKEGDKVAILSD
ILGDEDHLGDMDFKVCGTSKGITSIQMDIKITGLTTEIMSRALEQARQGRIHILGEMAKT
LATSRKEISQYAPRITTIQIRPEFIKNVIGPGGKVIKDIIARTGAAINIEDSGRVDIASA
NGEAVKAAIAMIQALTREAEIGKIYTGTVRKIAEFGAFVELFPGTDGLIHISELSDKRVK
SVSDVLKEGDEVLVKVVSIDKTGKIRLSRKEAMAERAAAQQGAAGEAVPAQAPTATQPDA
KA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagagcgtcacgattggcgagagcgagctgagcatcgaggtcggccggatg
gccaagcaggccgacggcgcggtggtggtgcgatacggcgacaccatgctgctcgtcacg
gcggtgagcgcgcgcgagaagaaggacgtcgacttcctcccgctcacggtggagtaccag
gagaagctgtactcggcgggccgcatccccggcagctacttcaagcgcgagggccggctg
acggagaaggagacgctggccagccgtctggtggaccgctcgctgcgtcccctgttcccg
gaaggctacgcgtacgagacgcaggtcatcgccggcgtcatctcctcggacccggagaac
gagggtgacatccatggcatcaccggcgcctccgcggcgctgtgggtgtcggacatcccg
ttcaacggccccctcgccggcatccgcgtgggccgcgtcggcggtcagctcgtggccaac
cccacggcgaagcagcgcgagcagagtgatttggacctcgtcatggcggtcagccgcgag
gccatcgtcatggtggagggtggcgcggaggaggtctccgaggcggacatggtggccgcg
ctcgagttcggcttcaagacggcgcagcccgcgctggacctgcaggacgagctgcgccgc
gagctgaagaagcaggtgcgctccttcgacaagattccctccgtggacgaggggctgcgc
gccaaggtgcgcgagctggccatggacggcatcaaggcgggctacggcatcaaggagaag
ggcgctcgctacgaggcgctgtccaaggcgaagaaggacgcgctcgcgaagctcaaggag
cagctcggtgagggctacaccccgctggtggagaagcacgccaagcaggtggtggaggac
ctgaagtacgagcacatgcgtgagatgacggtcaacggcggccgcatcggcgggcgtccg
cacgacgtggtgcgcccgattacgtgcgaggtcggcgtgctcccgcgcacgcacggcagc
gcgctcttcacgcgcggcgagacgcaggcgctcgtggtggccacgctgggcaccagcgag
gacgagcagcgcctggagatgctgggcggcatggccttcaagcgcttcatgctgcactac
aacttcccgccgttcagcgtgaacgagaccaagccgctgcgcggcccgggccgccgtgaa
gtcggccacggtgcgctggcggagcgcgcgctgcgaaacatggtgccgaagagcgagtcc
ttcccgtacacggtgcgcctggtgtcggacatcctggagtccaacggctcctcgtccatg
gcctccgtctgcggcggcaccctggcgctgatggacgcgggcgtccccatcaaggcgccg
gtggccggcatcgccatgggcctcgtgaaggagggcgacaaggtcgccatcctctcggac
atcctcggtgacgaggaccacctgggcgatatggacttcaaggtgtgcggcacctcgaag
ggcatcacctccatccagatggacatcaagattaccggtctcacgacggagatcatgagc
cgcgcgctggagcaggcgcgtcagggccgcatccacatcctgggtgagatggcgaagacg
ctggcgacttcccgcaaggagatcagccagtacgcgccgcgcatcaccaccatccagatt
cgtcccgagttcatcaagaacgtcatcgggccgggcggcaaggtcatcaaggacatcatc
gcccgcacgggtgccgcgattaacatcgaggactcgggccgcgtggacatcgccagcgcg
aacggtgaggccgtgaaggccgccatcgcgatgattcaggcgctgacccgcgaggcggaa
atcgggaagatctacacgggcacggtgcgcaagattgcggagttcggcgccttcgtggag
ctgttcccgggcaccgacggcctcatccacatctccgagctgtccgacaagcgcgtcaag
agcgtgtccgacgtgctgaaggagggcgacgaggtgctggtgaaggtggtcagcatcgac
aagacgggcaagattcgcctctcccgcaaggaggcgatggcggagcgcgcggcggcgcag
cagggcgcggccggcgaggccgtgcccgcgcaggcgcccacggcgacgcagccggacgcc
aaggcgtag
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