Pyxidicoccus parkwayensis: JY651_28410
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Entry
JY651_28410 CDS
T09992
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JY651_28410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppak03400
]
JY651_28410
Enzymes [BR:
ppak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JY651_28410
DNA repair and recombination proteins [BR:
ppak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JY651_28410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSQ19260
LinkDB
All DBs
Position
complement(7657585..7658268)
Genome browser
AA seq
227 aa
AA seq
DB search
MPKRPPVQTAAPLIPESPTYDKLRKAASHCQACPLWKTGTQTVFGEPAGRPHRGPRVMLV
GEQPGDQEDRAGKPFVGPSGRLLDEALEAAGIDRSQVYVTNTVKHFKWTGQGKRRIHAKP
NTSEVRACLPWLEAEIRVFRPDVIVCLGATAAQALLGKDFRVTQSRGQPMSSDWARVVVA
TVHPSSILRAPDPEAREAQLDAFIDDLRTVARLIHGGAEAGEGAHAP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgtcctcccgtccagaccgcggcccctctcatccccgagtccccgacgtac
gacaagctccgaaaggcggcctcgcactgccaggcgtgcccgctgtggaagacgggcacc
cagaccgtcttcggtgagcccgccggaaggccccatcgcggcccccgagtcatgctggtg
ggggagcagccgggagaccaggaggaccgcgccggtaagcccttcgtggggccgtccggc
cggctgctggacgaggcgctggaggcggccggcatcgaccgctcgcaggtgtacgtcacc
aacacggtgaagcacttcaagtggaccggccaggggaagcggcgcatccacgcgaagccg
aacacgtcagaggtccgcgcctgtctgccgtggctggaggcggagattcgcgtgttccgc
ccggacgtcatcgtctgcctcggcgccacggccgcgcaggcgctcctgggaaaggacttc
cgcgtcacgcagtcgcgcgggcagcccatgtcgtcggattgggcgcgcgtggtggtggcc
acggtgcacccgtcgtccattcttcgggccccggacccggaggctcgcgaggcgcagctc
gacgcgttcatcgacgacctgcgcacggtggcgcggctcatccacggcggcgcggaggcg
ggggagggcgcgcacgcgccgtga
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