Pyxidicoccus parkwayensis: JY651_28945
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Entry
JY651_28945 CDS
T09992
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak03420
Nucleotide excision repair
ppak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JY651_28945
03430 Mismatch repair
JY651_28945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppak03400
]
JY651_28945
Enzymes [BR:
ppak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JY651_28945
DNA repair and recombination proteins [BR:
ppak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JY651_28945
MMR (mismatch excision repair)
Other MMR factors
JY651_28945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QSQ19356
LinkDB
All DBs
Position
complement(7748653..7750728)
Genome browser
AA seq
691 aa
AA seq
DB search
MDLSKLNPPQREAVVTLQGPLLVLAGAGSGKTRVITHRIVHLLNERPGHLMARNILAVTF
TNKAATEMKERLVHMAGPRAQGVLVCTFHAFGAEVLREDIHRLGWPKKFAIADMGDQLAN
IRRAMREHKIDDRAFDARKVLTLISKAKNSGQVPQPKPEGIGDDYDLITHLVYPDYQLAL
KAQGSVDFDDLLLLPTRLLREFPDLYAKYTQRFRYLLVDEFQDTNIAQLELLKLLAGQQR
NVCAVGDDDQCIYSWRGAEVRNILDFDRFFPGGKEVRLEQNYRSVQMVLDAANAVIAKNP
ERKAKQMWTDRKGGPRVKVVSCPNDEEEARFVAHEIQKHMSLGVPADEIAVLYRTNGQAH
PVEEMLREKNIPYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLLRIVNVPSRGIGDV
TMERLAVHARGEGVTLWTVMRKAGDYEDLPPGAGGKVLEFVEMIERYRAAYEHGQLATAT
RKLLEEIGFAEATRAHATSSTIADKKLKSVDMVINSLENFEKREGPKASLLTYLNRLSLD
TRQEEEEVPGGHRRVTLMTVHASKGLEYRLVFFIGMEEDLMPHGGMQGEPQNIEEERRLC
YVGITRAKELLYLTRTNVRTKRGKEVPRTPSRFLEDLPEEVVEKMDLEAPRQGPPTTEEK
NFFANLKERFKKPPPGGSAGPTPGRSGGAAG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcgaagctcaaccctccgcagcgcgaggccgtggtgaccctccagggaccg
ctcctcgtgctggcgggcgcaggcagcggcaagactcgcgtcatcacccaccgcatcgtc
cacctgctcaacgagcggccgggccacctcatggcccgcaacatcctcgccgtcaccttc
accaacaaggcggcgacggagatgaaggagcgcctggtccacatggccggcccgcgcgcc
cagggcgtgctggtgtgcaccttccacgccttcggcgcggaggtgctccgcgaggacatc
caccgcctcggctggccgaagaagttcgccatcgcggacatgggcgaccagctcgccaac
atccgccgcgccatgcgcgagcacaaaatcgacgaccgcgccttcgacgcgcgcaaggtg
ctcacgctcatctccaaggcgaagaactccggccaggtgccccagcccaagcccgagggc
atcggtgacgactacgacctcatcacccacctcgtgtacccggactaccagctcgcgttg
aaggcgcagggctcggtggacttcgatgacctgctgctgctccccacgcgcctgctgcgc
gagttcccggacctctacgccaagtacacgcagcgcttccgctacctcctggtggacgag
ttccaggacaccaacatcgcgcagctggagctgttgaagcttctggccggccagcagcgc
aacgtgtgcgcggtgggtgacgacgaccagtgcatctactcgtggcgcggcgccgaggtg
cgcaacatcctcgacttcgaccgcttcttcccgggagggaaggaggtacggctggagcag
aactaccgctccgtgcagatggtgctggacgcggccaacgccgtcatcgccaagaatccc
gagcgcaaggccaagcagatgtggaccgaccgcaagggcggcccgagggtgaaggtggtg
agctgccccaacgacgaggaggaggcccgcttcgtcgcacatgaaatccagaagcacatg
tcactgggtgtccccgcggacgaaatcgcggtgctctaccgcaccaacggccaggcccac
ccggtggaggagatgctgcgcgagaagaacatcccctacgaggtggtgggcggcagcgag
ttcttcgaccggcgcgaggtgaaggacgtcatcgcgtacttcaaggtcatcgtgaacaag
ctggacgaaatctcgctcctgcgcatcgtcaacgtgccctcgcgcggcattggcgacgtg
acgatggagcggctcgccgtccacgcgcgcggcgagggcgtcacgctgtggacggtgatg
cgcaaggccggcgactacgaggacctcccgcccggcgccggcggcaaggtgctcgagttc
gtggagatgatcgagcgctaccgggccgcgtacgagcacgggcagctcgccaccgccacg
cgcaagctgctggaagagattggcttcgccgaggccacgcgcgcccacgccacgtcctcc
accatcgcggacaagaagctcaagagcgtggacatggtcatcaactcgctggagaacttc
gagaagcgcgagggccccaaggcgagcctcctcacgtacctcaaccgcctcagcctggac
acgcgccaggaagaggaggaggtgccgggcggtcaccgccgcgtcacgctgatgacggtg
cacgcctccaagggactggagtaccggctcgtcttcttcattggcatggaggaggacctg
atgccccacggcggcatgcagggcgagccgcagaacatcgaggaggaacggcgcctctgc
tacgtgggcatcacccgcgccaaggaattgctgtacctcacccgcaccaacgtccggacc
aagcgcggcaaggaggtgccccgcacgccctcccgcttcctggaggacctgccggaggag
gtggtggagaagatggacctggaagcaccgcgtcagggtccgcccaccacggaggagaag
aacttcttcgccaacctgaaggaacgcttcaagaagcccccgccgggaggctccgcgggg
cccactcccgggcggtccggaggagcggccgggtag
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