Pyxidicoccus parkwayensis: JY651_31055
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Entry
JY651_31055 CDS
T09992
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppak
Pyxidicoccus parkwayensis
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppak03009
]
JY651_31055 (rimO)
Enzymes [BR:
ppak01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JY651_31055 (rimO)
Ribosome biogenesis [BR:
ppak03009
]
Prokaryotic type
ribosomal protein modification factors
JY651_31055 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
PTH2
Motif
Other DBs
NCBI-ProteinID:
QSQ19715
LinkDB
All DBs
Position
8248862..8250286
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AA seq
474 aa
AA seq
DB search
MEDTKSLYMMTLGCPKNRVDSEVMLGTLQHHGYKLVQEASEAQVIVVNTCAFIGPAKQES
VDSILEMAELKKSGACKTLVVTGCLSQRYGQELAKEMPEVDHFLGTSAYAQIGDLLAAEA
SPRQVIPDPDYIHDANTPRVNSMPKYTAYLKVSEGCDNACAFCIIPTLRGGQRSRPIDDI
VTEATRLAESGVQELNLVAQDLTAYGHDLPGKPKLHDLLKALVKVDVKWIRLHYAYPRVF
PDELIDVMATEPKIARYLDMPVQHVSDKLLLSMKRGRNSEFLKSLLAKLRERVPGLVMRT
SLIVGLPGETEEDFEMLKEFVKQQRFERLGVFQYSDEEGTAAYDLPDKVPQKTIERRWRE
VMAIQKRINREQNKKLVGKRLEVLVEGPAPETEHLLVGRHQGQAPDIDGMVYINDGLAYP
GELVTVEVTEAHDYDLVARVVERPDPKQRQHTARDAHPAPVSLGTKPRTATHAE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacaccaagagcctgtacatgatgaccctcggctgcccgaagaaccgggtggac
tccgaggtgatgctgggcacgttgcagcaccacggctacaagctggtgcaggaggcctcc
gaagcccaggtcatcgtggtcaacacgtgtgccttcatcggccctgcgaagcaggagtcg
gtggactccatcctggagatggcggagctgaagaagtccggcgcctgcaagacgctggtg
gtgacgggctgtctgtcccagcgctacggccaggagctggcgaaggagatgccggaggtc
gaccacttcctcggcaccagcgcctacgcgcagattggcgacctgctcgccgccgaggca
tcgccgcgtcaggtgattccggaccccgactacatccacgacgccaacacgccgcgcgtc
aactcgatgccgaagtacacggcgtacctcaaggtgtccgagggctgcgacaacgcctgc
gccttctgcatcatccccacgctgcgcggaggccagcgctcgcgccccatcgacgacatc
gtcaccgaggcgactcggctggcggagagcggcgtgcaggagctgaacctcgtcgcgcag
gacctcaccgcgtacgggcatgacctgccgggcaagccgaagctgcacgacttgctcaag
gcgctggtgaaggtggacgtgaagtggattcgcctccactacgcctacccgcgcgtgttc
ccggacgagctcatcgacgtcatggccacggagccgaagattgcccggtacctggacatg
ccggtgcagcacgtcagcgacaagctgctcctgtcgatgaagcgcggccgcaactcggag
ttcctcaagagcctgctggcgaagctgcgcgagcgcgtgcccgggctggtgatgcgcacg
tcgctcatcgtcggcctgccgggggagacggaagaagacttcgagatgctgaaggagttc
gtgaagcagcagcgcttcgagcggctcggcgtcttccagtactccgacgaggagggcacc
gcggcgtacgacttgccggacaaggtgccgcagaagacgattgagcgccggtggcgcgag
gtgatggccatccagaagcgcatcaaccgcgagcagaacaagaagctcgtggggaagcgg
ctggaggtgctggtggagggccccgcgcccgagacggagcacctgctggtggggcgccac
cagggccaggcgccggacatcgacggcatggtctacatcaacgatggcctggcgtacccg
ggggaactcgtcaccgtggaggtgacggaggcccacgactacgacctcgtggcccgcgtg
gtggagcgcccggacccgaagcagcgccagcacaccgcgcgcgatgcgcaccccgcgccc
gtgtcgctgggcaccaagccgcgcacggcgacgcacgcggagtag
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