Pyxidicoccus parkwayensis: JY651_47110
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Entry
JY651_47110 CDS
T09992
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ppak
Pyxidicoccus parkwayensis
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppak03016
]
JY651_47110 (thpR)
Enzymes [BR:
ppak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
JY651_47110 (thpR)
Transfer RNA biogenesis [BR:
ppak03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
JY651_47110 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
QSQ22600
LinkDB
All DBs
Position
complement(12137130..12137684)
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AA seq
184 aa
AA seq
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MRLFTAVTLGSTIESRATSEMERLRALAPHSRWVKAEGVHLTLVFLGEVEEARLPSLREA
LEPVGSRHAPFVLSVGGGGSFGSPSRPRVLWADVRGETDALKALQADAAAVLQPLGFESE
HREYTAHLTLARAKDPHGDPALARCAQALHTSDFGEGRVDRLILFESRGGHYHSRLEVPL
TRSK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgttcaccgccgtcacgctgggaagcacgattgagtcgcgcgccacctcggag
atggagcgactgcgcgcgctggcgccgcattcccgctgggtcaaggcggagggcgtgcac
ctcacgctggtgttcctgggcgaggtggaggaggcgcggctgccgtcgctgcgcgaggca
ctggagcccgtgggctcgcgacacgcgcccttcgtgctgtccgtgggaggaggcggcagc
ttcggctcgccctcgcgcccgcgcgtgctctgggcggacgtgcgcggggagacggacgcg
ctgaaggcgttgcaggcggacgccgccgccgtgctgcaaccgctcggcttcgagtccgag
catcgcgagtacaccgcgcacctcacgctggcacgcgcgaaggacccgcacggagacccg
gccctcgcgcggtgcgcgcaggcgctgcacacgtcggatttcggcgagggacgcgtggac
cggctcatccttttcgagagccggggcgggcactaccactcgcgcctggaggttccgctc
acgcgctcgaagtga
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