Polynucleobacter paludilacus: AOC06_00735
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Entry
AOC06_00735 CDS
T08333
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOC06_00735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_00735
Enzymes [BR:
ppal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AOC06_00735
DNA repair and recombination proteins [BR:
ppal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOC06_00735
Prokaryotic type
AOC06_00735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QWD87141
LinkDB
All DBs
Position
complement(125586..126353)
Genome browser
AA seq
255 aa
AA seq
DB search
MLISPEDIPKDWRALLGDYFSSPEWFDLQARLQSELEAHPELIRPEAKNFFNALRLTPVD
QVKVIILGQDPYHSPGLAQGLAFSIPADIPTNSREFPSSLRNIRKALILEGFGDLPHGDL
HHWASQGVLLLNTALSVRLGEAGSHTNLGWSSLINALIHSLAIQRAGLVWMLWGGHAQSK
LSLIEPSRDQLVLCASHPSGLGVYKTDRPFLKLGGQESCGHFTKANQWLDSHQQSSIVWV
KADQKPTGTQGGLFE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcaccagaagatattccgaaggattggcgggcattacttggggactatttc
agttcgccagaatggtttgacttgcaagctcgtctgcaatctgaacttgaagcgcatcca
gaattgatccggcctgaagccaagaattttttcaatgcattgcgtttgacaccagtcgat
caagtcaaggtcatcattctggggcaagatccctatcactccccaggcctcgctcaaggt
ttagctttttctattccggcagatattcctacaaactctagagagtttccaagctcacta
cgcaatattcgtaaagccctgattctcgaaggctttggagatttacctcacggcgatttg
catcattgggcctcgcaaggtgttctcttactcaatacggcactcagtgtaagactgggc
gaagccggaagccataccaatttaggctggagctctctgataaatgcattaattcactct
ttagccatccagagggctggtctagtttggatgctttggggtggtcatgcgcaatcgaaa
ttgagcctgattgaaccaagcagagatcaattggtcttgtgtgcttcccacccttctgga
cttggggtatataaaaccgatcgtccttttttaaaactcggcgggcaagaaagctgtggg
catttcacaaaagccaatcagtggctcgacagccatcagcaatcttcgattgtttgggtt
aaggcagatcagaaaccaactggcacacagggaggtttatttgaataa
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integrated database retrieval system
