Polynucleobacter paludilacus: AOC06_01045
Help
Entry
AOC06_01045 CDS
T08333
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOC06_01045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppal03019
]
AOC06_01045
Messenger RNA biogenesis [BR:
ppal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AOC06_01045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QWD87200
LinkDB
All DBs
Position
complement(187940..188539)
Genome browser
AA seq
199 aa
AA seq
DB search
MLDREGYRANVGIVLLNGHNEVFWGKRVGQHSWQFPQGGIQHGESPEEAMYRELHEEVGL
LPEHVQIIGRTRDWLRYDVPEEYLRRQHPTRVHRPAYRGQKQIWFLLRLVGLDSDIHLRA
SEHPEFDAWRWVPFWIELNSVIEFKREVYQLALSELARYLSRSSKMQELVWGSPLELMQS
FYPKEGSVKDAKEGKYSND
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgtgaaggatatagagccaatgttggcattgtcctcctcaatggccacaac
gaggttttctggggaaaacgtgttgggcagcattcgtggcagtttccgcagggcggaatt
cagcatggcgagagtccagaagaggccatgtatcgcgaattgcatgaggaggtaggctta
ctgcctgagcacgtccaaattattgggcgaacccgggattggcttcgctatgacgtccct
gaagagtacttgcggcgacaacaccctacccgcgttcatcgacccgcctatcgtggtcaa
aagcaaatctggtttctattgcgtttagtcgggctagatagtgatattcatttaagagca
tctgagcacccagaatttgatgcttggcgctgggttccattctggattgagctcaattcc
gttattgaattcaaacgtgaggtttatcagctcgctctttctgaactggctcgatatctg
agtcggagtagcaaaatgcaagaattggtctggggatctcctcttgaactcatgcaatct
ttttatcccaaagagggctctgtcaaagacgcaaaagagggcaaatactcgaatgattaa
DBGET
integrated database retrieval system
