Polynucleobacter paludilacus: AOC06_01055
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Entry
AOC06_01055 CDS
T08333
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal02024
Quorum sensing
ppal03060
Protein export
ppal03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AOC06_01055 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AOC06_01055 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOC06_01055 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppal02044
]
AOC06_01055 (ffh)
Enzymes [BR:
ppal01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AOC06_01055 (ffh)
Secretion system [BR:
ppal02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AOC06_01055 (ffh)
Eukaryotic Sec-SRP protein
AOC06_01055 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
cobW
CbiA
Zeta_toxin
nSTAND3
AAA_16
YqeC
AAA_30
AAA_31
T2SSE
AAA_14
Thymidylate_kin
APS_kinase
ATP_bind_1
AAA_33
AAA_19
ArsA_ATPase
TXNDC16_3rd
TsaE
KTI12
Motif
Other DBs
NCBI-ProteinID:
QWD87202
LinkDB
All DBs
Position
complement(190331..191713)
Genome browser
AA seq
460 aa
AA seq
DB search
MLENLTDRLSRVVKTMRGQARLTESNTTEMLREIRLALLEADVALPVVKTLLEQIKFKAL
GEEVVGSLSPGQALVGLVQRELAQVMSGDGLKSGEINLATQPPAVILMAGLQGAGKTTSV
GKLAKWLQEKKKKKVLTVSCDVYRPAAIEQLATVSKQVGAECFPSSVDQKPAAIALAALD
WARRHYFDVLLVDTAGRLGIDEVLMQEIEDLHDKLNPIETLFVVDAMLGQDAVNTAKAFH
DALPLTGVILTKLDGDSRGGAALSVRQVTGVPLKFIGTAEKMDGLEAFDAERMANRILGM
GDILALVEQAQQSVDVAKAEKLATKISKGGFDLGDFRDQISQMQQMGGMASLMDKLPSHM
AQAASKANMGQADKQIVRMRGIIDSMTPKERSKPELLKASRKRRIAAGAGVEVQEVNRLL
AQFEQMQTMMKQFKGGKMARAMAGMAAKGAAKGIGGLFKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaacctgaccgatcgcctatctcgtgttgtgaaaaccatgcggggacaagcc
cgcctgaccgaaagcaacactacagaaatgcttcgggaaatccgcttagccctattagag
gctgacgtagcccttccagtcgttaaaacgcttcttgagcaaattaaatttaaagccctt
ggtgaagaggtggttggaagtctgagtcctgggcaggccttagtcgggttagtccaacga
gaactcgctcaggtaatgtctggtgatgggttaaagagcggtgaaatcaatttagcaacc
caacctccagcagtcattctgatggctggcctgcaaggtgctggtaaaaccacttcggta
ggcaaactggctaaatggctgcaagaaaaaaagaaaaagaaagtgctcaccgtctcatgt
gacgtgtaccgcccggctgctatagaacagctcgctaccgttagcaaacaagttggtgcc
gagtgctttccgagtagcgtcgatcaaaagcccgctgctattgcgcttgcagccttagat
tgggcacgtcgtcattactttgatgtcctgctggtagacactgctggccgactgggtatc
gacgaggtactcatgcaagagattgaagatctgcatgacaaactcaacccgattgagacc
ctatttgtcgtcgatgccatgcttggtcaagatgcggtcaacaccgccaaagcttttcat
gatgcgttgccactgacgggcgtcattctcaccaaactggatggtgattcacgtggaggt
gctgcgctctcagttcgccaagtaacgggcgtacccctcaagttcattggcactgctgaa
aaaatggatgggctcgaagcattcgatgccgagcgtatggcgaaccgtattttgggcatg
ggcgatattttggctctggtagaacaggcccaacaaagtgtggatgttgctaaagcagaa
aagctagcaacaaaaatttctaagggagggtttgatctgggagacttccgagatcaaatt
tctcaaatgcagcaaatgggtggtatggccagcctaatggataagctcccaagtcatatg
gctcaggcagctagtaaagccaatatgggtcaagctgacaaacaaattgtacggatgcgc
ggcatcattgatagcatgacgccaaaggaacgcagcaaacctgaacttctgaaagccagt
cgtaaacgtcgtattgctgcaggggctggcgttgaagttcaagaggtcaatcgcttgctc
gcacagtttgagcaaatgcaaaccatgatgaagcaattcaagggcggtaagatggcacgc
gccatggcgggcatggccgctaaaggagccgccaagggtatcggcggcttatttaaaaag
taa
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