Polynucleobacter paludilacus: AOC06_01255
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Entry
AOC06_01255 CDS
T08333
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_01255
Enzymes [BR:
ppal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AOC06_01255
DNA repair and recombination proteins [BR:
ppal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AOC06_01255
Prokaryotic type
AOC06_01255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QWD87238
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All DBs
Position
complement(233981..235453)
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AA seq
490 aa
AA seq
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MQKALVWLRRDLRLYDNAALHHALKNSQQVWVAFIFDQTILSPLLKQGLNEQGLKADRRV
DFIWHGIEQLDQELRKQGGGLIVQFNKPSESIPEIAKALGVETVFTNHDYEPTAIARDEQ
IQSSLTKSGIAFESFKDQVIFEKKEILTNSNTVFSVFTPYKNNWLKTLQAKDLAPYDCVA
KKGQFASIPAKLDRGIPSLKSMGFTQTGIETYLPPGAVGGEHFLKDFLHRIDQYQMGRDF
PAIKGVSYLSTHLRFGMLSIRGLVREAHRRMLAGSMGATIWLSELIWRDFYFMILANHPR
LASGEAFKPDYDKIDWESGATAKKLFTAWCEGKTGYPLVDAAMHQLNQSGYMHNRLRMVV
ASFLTKDLGIDWRWGEAYFAEHLNDFEFSSNNGGWQWASSSGCDAQPYFRIFNPITQSEK
FDAEGKFIRRYLPQLEKLSNKSIHAPWLAGHIELEAAGLLLGRDYPMPIVDHDEARKKTL
VRYNVVKKAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagctcttgtatggctccgccgcgaccttcgcctgtatgacaatgcagccctc
catcacgccctgaagaacagccaacaggtttgggtagcttttatctttgatcagaccatt
ctttccccgctcctaaagcagggcttaaatgagcaaggcctcaaagcagaccgtcgggtg
gatttcatatggcacggtatagagcaactggatcaagaactgcgcaaacaaggcggtgga
ctcatcgttcaatttaataagcctagtgaaagcattcccgaaattgccaaagcgcttggg
gttgaaaccgtttttactaaccatgattacgagccaacggccattgcgcgcgatgaacaa
attcaatcctctctcacaaaatcaggtattgcctttgagagcttcaaagatcaggtgatc
tttgagaaaaaagaaatcctcaccaattccaatacggttttttcagtctttactccatac
aaaaataactggctgaaaactttgcaagcaaaagatctggcgccctatgactgcgttgct
aagaaaggtcagtttgcttcaatccccgccaagcttgaccgagggattccttctttgaag
tcgatgggctttactcaaaccggaatcgagacatacttaccccccggagcagtaggtggg
gaacattttttaaaagattttttacatcgcattgatcaatatcagatgggtcgagatttt
ccagcgatcaaaggtgtcagctatctctcaacacatcttcgctttggcatgctctcgatt
cggggcttggttagagaagcccatcgtcgtatgttggcagggagcatgggtgcaaccatt
tggttaagtgagcttatctggcgtgatttttatttcatgattttggctaatcaccctcgt
cttgcgagtggagaagctttcaagcccgactatgacaagattgattgggaaagtggtgct
actgctaagaaactctttacggcttggtgcgagggtaaaacaggctatcccttagtggac
gcagcaatgcatcaactcaatcaaagtggctacatgcataatcgtctgcgcatggttgta
gcaagttttctgactaaggatcttggcattgactggcgctggggcgaagcttattttgct
gagcaccttaatgactttgagttttcgtccaacaatggtggctggcagtgggcctcctct
tcaggttgtgatgcgcagccctacttcagaatcttcaacccgattacgcaatctgagaag
tttgatgccgagggtaaattcattcgacgctatctgcctcagctcgagaaactctccaat
aaatcgattcatgctccctggctagcaggtcatattgaacttgaggctgcgggactgctg
ttagggcgtgactaccccatgccgattgtcgatcatgatgaggctcgtaaaaagactctg
gttcgctataacgttgttaaaaaggcggcatag
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