Polynucleobacter paludilacus: AOC06_01385
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Entry
AOC06_01385 CDS
T08333
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal00740
Riboflavin metabolism
ppal00790
Folate biosynthesis
ppal01100
Metabolic pathways
ppal01110
Biosynthesis of secondary metabolites
ppal01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
AOC06_01385 (ribB)
00790 Folate biosynthesis
AOC06_01385 (ribB)
Enzymes [BR:
ppal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
AOC06_01385 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
AOC06_01385 (ribB)
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
QWD87262
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Position
complement(258075..259220)
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AA seq
381 aa
AA seq
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MSIKLAPTNEIVADLRVGKMVILVDEEDRENEGDLVLAADHVSAEAVNFMAKYGRGLICL
TLTREHCQQLNLPLMVRDNGTSMGTNFTVSIEAASGVTTGISAADRAHTIKTAVAKNAKP
NDLVQPGHIFPLMAQPGGVLIRSGHTEAGCDLAAMAGCSPSAVICEIMKDDGSMARLPDL
LEFAKEHQLKIGSIADLIQYRSQHESIVKRQGEREFVTPWGTFTGIIYQDTPSASMHIAL
VKGKPSESVETLVRVHEPVTVLDFLDGNHSNHSWPLGKALEALAQAPAGVAVLLNAAGIA
APGDADWLSQFTKLNQTANTPANPALTRKTDFRSYGIGAQILKDLGVGKMRLLAKPNPVP
SMSGYKLEVTGYLPFSPDQQA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtctataaagcttgcccctacaaacgaaatcgttgccgacctacgggttggcaagatg
gtgatcttggtcgatgaagaagaccgagagaatgaaggcgatctcgtgctcgccgctgac
catgtgagcgctgaagctgttaatttcatggctaagtatgggcggggcctgatttgctta
accttgacgcgcgaacattgccaacaactgaatctgcctttgatggtgcgcgataacggc
acctctatgggaacgaactttactgtctcgattgaggccgcctctggtgtcaccaccggg
atttctgcagctgatcgtgcccacaccatcaaaaccgcagtggctaaaaatgccaagccg
aatgatctggttcagcctgggcatatttttccattaatggctcagcctggcggagtatta
attcgttcaggccataccgaggcaggttgcgatcttgctgctatggcaggctgctcgcca
agtgcagtcatttgcgagatcatgaaagatgatggcagcatggcacgcttaccagatctg
ctcgagtttgccaaagaacatcaactcaaaattggcagcattgccgatttgattcaatac
cgcagtcaacatgagagcattgttaagcgccaaggtgagcgtgagtttgtgacaccatgg
ggcacatttactggaatcatttatcaagatacgccaagcgcttcaatgcatattgcttta
gtgaagggcaagccctctgaatcggtcgagaccctagtgcgggttcatgagccagtgacg
gtattggatttcttggatggaaatcatagtaatcactcctggccactcggcaaggccctc
gaggccttggctcaagctcctgctggcgtagctgttttactcaatgctgctggcatcgct
gcacctggagatgcagactggctctcacaatttaccaagctcaatcaaactgcaaatacc
ccagccaatccagcgctcactcgtaagaccgatttccgaagctatggcatcggcgcccaa
attctgaaagatctcggtgtaggaaaaatgcgtttactcgccaagccaaacccagtcccc
agcatgtctggctataaactagaggttacgggctaccttccttttagccctgatcaacaa
gcgtaa
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