Polynucleobacter paludilacus: AOC06_02005
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Entry
AOC06_02005 CDS
T08333
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppal03009
]
AOC06_02005
Enzymes [BR:
ppal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
AOC06_02005
Ribosome biogenesis [BR:
ppal03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AOC06_02005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QWD87376
LinkDB
All DBs
Position
357674..358396
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AA seq
240 aa
AA seq
DB search
MAKPLSLEKILFSQGFGTRRYCSDLVYAELVKVNGVLAEDPEERIATEDLVLNVEGQDWE
FHEKAYIAFHKPANYECSHKTTHHPSVYSLLPRPFVERGLQCVGRLDFDTTGLLLISDDG
QFIHKMTTPKKNIGKVYKITTAEPIQSKQLDHLLEGVVLDDDPKPCFAKACEQIDEHHLA
MTIVEGRYHQVKRMMAAVGNHVAQLHRTQIGAYSMPKDLAEGQWRWLYESDLQQLAKSVE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaccccttagcttagaaaaaattctgtttagtcagggctttggcacacgccgt
tactgcagtgatttggtttatgccgaactagtcaaggtcaatggtgtcttggccgaggat
ccagaagaacgaattgcgactgaagatcttgttctgaatgtagagggtcaagattgggaa
tttcatgagaaggcttatattgcatttcataagcccgccaactatgagtgctcgcataaa
acaacgcatcatcccagcgtctatagtttgctgcccagacccttcgttgagcgtggcctc
caatgcgtggggcgtttagatttcgatacgactgggctgttgctgatctcggatgacggt
caattcattcacaagatgacgacgccaaagaagaatattggtaaggtttataaaatcact
acagcagagccgattcagagcaaacagctcgatcatttgctcgagggtgtagtgttagat
gacgatccaaagccttgctttgccaaggcctgtgaacagatagatgagcatcatcttgcg
atgaccatcgttgaagggcgttatcaccaagtcaagcgcatgatggcggctgtcggaaat
catgtagcacaattacatcgtacccaaattggcgcgtattcaatgccaaaagatttggct
gagggccaatggcgttggctctatgaatctgatttacagcaacttgcaaagagcgttgaa
tga
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