Polynucleobacter paludilacus: AOC06_03495
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Entry
AOC06_03495 CDS
T08333
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03030
DNA replication
ppal03430
Mismatch repair
ppal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC06_03495 (dnaX)
03430 Mismatch repair
AOC06_03495 (dnaX)
03440 Homologous recombination
AOC06_03495 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppal03032
]
AOC06_03495 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_03495 (dnaX)
Enzymes [BR:
ppal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC06_03495 (dnaX)
DNA replication proteins [BR:
ppal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOC06_03495 (dnaX)
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOC06_03495 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_14
AAA_5
AAA_22
AAA_2
AAA_24
AAA_19
Glyco_tranf_2_5
AAA_30
AAA_18
nSTAND3
Mg_chelatase
TsaE
RNA_helicase
AAA_assoc_2
SKI
AAA_28
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QWD87647
LinkDB
All DBs
Position
643096..644727
Genome browser
AA seq
543 aa
AA seq
DB search
MTALALARSWRPKTFSQLVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCIGEDGQGKMTSTPCGKCSACTAIDQGRFVDYIEMDAASNRGVDEMAALLEKAAYAP
SNARYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLAAEKVDYETNALRVIAKAGQGSMRDALSLTDQAIAYAAGKVTEE
SVRGMLGTLDDAYLIRILDALASKDGATLLNISNEMGERSMSFSLALQDLSSLIQKIAAA
QIVPESVLEDWPEAAEVRRLATVFTKEEIQLFYQISITSRSDLSLAPDEQTGFAMTLLRM
LAFRPAGSEPQALKANVANTTPSRPAAPPARTAMPSNRSEPRAAAPASPKSPAASSERPD
WHTLMRALPIKGLVQQLAFQTELQDWADSATGIKATIVTPTPSLASDASVARLTEVLTAH
FGKPIKLTIEKGEVEGKSVAKIDAAIHQEKRQTAEQMIAADPFIQALEKEFGAKVVGGSV
KPL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattggcactagcccgttcgtggcgccctaaaactttttcccaattggtagga
caagaccatgtggtcaaggctttgacccatgctttggatcaggggcgcctacatcacgct
tggctctttaccggtacccgcggcgtgggtaaaaccacgattgcccgcattatggccaaa
gccctcaattgcatcggcgaagatggtcaaggaaaaatgacctcaacaccatgcggcaaa
tgctctgcctgtaccgcaatcgatcaaggtcgctttgttgactatattgagatggacgcc
gccagtaatcgtggtgtggatgagatggctgctctattagagaaagccgcctacgcaccc
agcaatgcgagatacaaggtctacatgattgacgaggtgcacatgctcaccaatcatgcc
tttaatgccatgctcaagactctggaagaacctcctgagcacgtcaagttcattctggcc
acaaccgatccccaaaagatccccgtcaccattctgtcgcgctgcttgcagttcaatctc
aagcaaatgccagtacctctcatcgttgagcatttggaaaaagtgcttgctgcagaaaaa
gtcgattacgaaaccaatgcactgcgcgtgatcgctaaagcaggccaaggctcaatgcgc
gatgctttatcgctgaccgatcaagcgattgcgtatgccgctggcaaagtcactgaagaa
tctgtccgcggcatgcttggcacattagacgatgcgtacctcattcgtattctggatgca
ctagccagtaaagatggcgcaactttactcaatatcagtaatgagatgggtgagcgcagc
atgtctttctcattagccttacaagatctatcgagtttgattcagaagattgctgctgcg
caaattgttccagaatcagttctagaagattggccggaagcagcagaagtgcgacgccta
gcaacagtctttaccaaagaagagattcagctcttttatcaaatcagcatcactagccgt
tctgacttatcgctcgcaccagatgagcaaacgggctttgccatgaccttgctgcgcatg
ctcgcatttagacctgccggctcagagcctcaagctcttaaagccaatgtagctaatacc
acgccttcacggcctgcagcgccaccagccagaacagcgatgccaagtaatcgctctgaa
cccagagctgccgccccagctagcccaaagtctccagccgcatctagcgagcgccctgat
tggcataccctgatgcgcgctttaccgattaaaggattagtgcagcagttggctttccag
actgagttgcaagactgggccgattccgcaacagggattaaagccacgattgtcactccc
acaccatcattggcatccgacgcttctgtagcccgcttaacggaagtgttgactgcgcac
tttggtaaacccatcaagctcacgattgagaagggtgaagtcgaaggcaagagcgttgcc
aaaattgatgcagcgatacatcaagagaaaagacaaactgccgaacaaatgattgcagcc
gatccgtttatccaagcgcttgaaaaagagtttggcgcgaaggtggttggtggttctgtg
aagccgctataa
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