Polynucleobacter paludilacus: AOC06_04045
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Entry
AOC06_04045 CDS
T08333
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal02020
Two-component system
ppal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AOC06_04045
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AOC06_04045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppal03021
]
AOC06_04045
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppal02035
]
AOC06_04045
Transcription machinery [BR:
ppal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOC06_04045
Bacterial motility proteins [BR:
ppal02035
]
Flagellar system
Flagellar assembly proteins
Stator
AOC06_04045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MSP1_C
AAA_14
MarR
UPF0122
DUF1548
UPF0147
Coprogen_oxidas
Motif
Other DBs
NCBI-ProteinID:
QWD87747
LinkDB
All DBs
Position
complement(753126..753857)
Genome browser
AA seq
243 aa
AA seq
DB search
MYKADGKLDKQNNLVGEHADMVKKMAYQIKAKLPANVEVDDLIQAGMIGLIDAANKYQDN
LGAQFKTYASQRVHGAIMDELRSSDWLPRNIRKQMRDVEKAIAGLQQSLGRAPTDSEIAK
KLKVSIDEYFQIINECSGHQLIYFDDVHKSDDEDHFLDRFIKSNNDVINGLLSRNFKESL
KEAIENLPEREKILMGLYYEQELNLKEIGAVLSISESRVSQMHSIAIARIRATMKEQLWT
GPA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggcagatggaaaactcgataagcaaaataacctcgtgggcgaacacgccgac
atggttaagaaaatggcttatcaaattaaagccaaactccctgccaacgtagaagtagat
gatctgattcaggctggaatgattggcctcattgatgcggcaaataagtaccaagataat
ctaggcgcacagttcaaaacctatgcctcgcaacgtgtgcacggtgcgattatggatgaa
ttgcgtagttcagattggctgcctcgcaatattcgtaaacaaatgcgggatgttgaaaaa
gccatcgccggtttacaacaatctttaggtagagcccctactgattcagagattgccaag
aagctcaaagttagtattgatgaatatttccaaatcatcaatgaatgtagcggccatcaa
ctcatctattttgatgatgttcataaatccgacgatgaagatcacttcctggatcgattt
attaaaagtaataatgacgttattaatggactgctctctagaaactttaaagaatcttta
aaagaagccattgagaatcttcccgagcgggaaaagattctaatgggtctttactacgaa
caagagctcaatttaaaagaaattggcgcagtcttaagtatttccgaatctcgcgtatct
caaatgcatagcattgccattgctcggatacgcgcaaccatgaaggagcagttatggacc
gggccagcgtag
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integrated database retrieval system
