Polynucleobacter paludilacus: AOC06_04275
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Entry
AOC06_04275 CDS
T08333
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppal03016
]
AOC06_04275 (truA)
Enzymes [BR:
ppal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AOC06_04275 (truA)
Transfer RNA biogenesis [BR:
ppal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AOC06_04275 (truA)
Prokaryotic type
AOC06_04275 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3098
Motif
Other DBs
NCBI-ProteinID:
QWD87892
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All DBs
Position
797584..798420
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AA seq
278 aa
AA seq
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MVRIALGVQYEGSQFCGWQTQAPPIRSVQAELEKAIESFIGSEGVANNPVKTITAGRTDT
GVHALGQVVHFDTSVERSDWSWVRGINSFLPSDIVINWAKLVSEDFSARFSAYERTYIYA
LHASPCRAPLVAHRAGFYMLPPDTWFDIPAMKKAAECLIGEHDFSSFRSAECQSKTPIKT
LYSIDIISEQPWLYFRIRGNAFLHHMVRNLVGSFLMIGVGKQDASWMQEILEARDRKVAA
PTFAPDGLYLAKIAYPEVFQIPDSWLQNSLLPSQLLDY
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atcgtgagaattgcattaggcgtgcagtatgagggtagtcagttttgtggttggcaaacc
caagcaccccccattcgctccgttcaagctgaattagaaaaagccattgaatctttcatt
gggagcgagggcgttgccaataatcccgtgaagacaattacagcaggccgaactgatacg
ggcgttcatgccttgggtcaagtggttcattttgatacgtcggtagagcgttctgattgg
tcttgggtcagaggcatcaattcctttttaccctctgatattgtgatcaattgggctaag
ctagtttcagaagatttcagcgcgagattttctgcttatgaaagaacctatatttatgca
ctgcatgctagtccatgccgcgctccgctagttgctcaccgggctggcttttatatgttg
ccgcccgatacttggttcgacattcccgcgatgaaaaaagcagccgagtgtttaattggc
gagcatgatttcagctcttttcgctccgcggaatgtcaaagtaaaacccccatcaaaacc
ctgtactcgatcgacattatttctgagcaaccttggttgtatttccggattcgcggcaac
gcttttttgcatcatatggtgcgcaatttggttgggtcattcttgatgattggcgttggt
aagcaagatgcttcttggatgcaggaaatcttggaggcaagggatcgaaaagtggctgca
ccaacattcgctcctgatggtctatatcttgccaaaattgcctatccagaggtattccag
atccccgattcctggctacagaattctttactaccgagccagctcctcgactattag
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