Polynucleobacter paludilacus: AOC06_04550
Help
Entry
AOC06_04550 CDS
T08333
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal00541
Biosynthesis of various nucleotide sugars
ppal01100
Metabolic pathways
ppal01250
Biosynthesis of nucleotide sugars
Module
ppal_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AOC06_04550 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppal01005
]
AOC06_04550 (kdsA)
Enzymes [BR:
ppal01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
AOC06_04550 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ppal01005
]
Lipid A
AOC06_04550 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Nudc_N
Motif
Other DBs
NCBI-ProteinID:
QWD86269
LinkDB
All DBs
Position
complement(841812..842666)
Genome browser
AA seq
284 aa
AA seq
DB search
MKLCGFNVGLDQRFFLIAGPCVIESEQSALDIAGELKAITSALNIPFIYKSSFDKANRSS
GTSFRGLGMEKGLEILAKVKREIGVAVLTDVHDITEIAEVAKVVDVLQTPAFLCRQTDFI
RACAQSGKPVNFKKGQFLSPYEMLNVIEKARAAAKEANLADQFMVCERGASFGYNNLVSD
MRSLAIMREANAPVVFDATHSVQLPGGQGNSSGGQREFVPVLARAAVAVGISGLFMETHP
EPSKALSDGPNAVPLNRMKELLESLVAIDTVVKKGNSFLENSFK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctgtggatttaatgttggtttagatcagcgcttctttttaattgccggccct
tgcgtcatcgagtcagaacaatctgctttggatattgccggtgagctaaaagcgatcacg
agtgcactcaatattccatttatctataaatcttcatttgataaagccaatcgctcttct
ggcacatcatttcgtggccttggtatggagaaggggttagaaattctagctaaggtgaag
cgcgaaatcggcgtagcagtgctaactgacgtacacgacattaccgaaattgctgaagtg
gctaaagtagtggatgtgctccagactccagccttcctgtgcaggcagactgatttcatt
cgcgcttgcgctcaaagcggtaagccagtcaacttcaagaagggtcagttcttgtccccc
tacgagatgctgaacgtgattgagaaagccagagcagccgcaaaggaggctaacctagca
gatcagtttatggtttgtgaacgcggcgcttcttttggttacaacaatttagtttctgat
atgcgtagcctcgctatcatgcgcgaagcgaatgccccagtggtatttgatgcaacccac
tcggttcaattacctggcggtcaaggcaatagcagtggcggtcaacgagagtttgtgccc
gtgcttgctagagctgcggttgctgttggtatcagcggcctctttatggaaacccatcct
gagccttctaaagcgctatcggatggccctaatgccgttcccttaaatcgcatgaaagag
cttctggaatcattggttgcaatcgataccgtggttaaaaagggcaattcctttttagaa
aatagctttaaataa
DBGET
integrated database retrieval system
